PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67222.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 552aa MW: 59690 Da PI: 8.3998

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.7	9.3e-11	344	418	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +re + +l + + k+ +W +++k+m+ +g + + C +kw+nl + ykki++ ++ GBG67222.1 344 WSTDEQMLLVRCKREQDMHLAglghnygQMRTKEWKWVDIAKRMANGGSPKDADDCMKKWDNLFQNYKKIQRFQN 418 9***********77766663332222567999*********************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MADLQRRLPL LLLVVVVFLH VCLSCRPWKQ RRKRRASTKR AVLQEERPMA GMKAHAILPA 60 AEGGRRPATT EPSRRYDPSM YSHLPSWETP LPPSDEEPEG DELPTFPLAS GSTQLLSQTV 120 LVGGSASSEQ GEYTSLLQQG FSGGAREASR TVITAAHASA RGLQQPRREQ TGPSTVRGGA 180 SVVGGVRSSP TARQHVSSAP SGERLTDNWD VRTAAAAASL RTSGARSSML NRTTASPSEG 240 RDEGACRPPA GSGVSVENIT RGVSNMRAHS DGGDDDRCGG DDADDGFREE VEAGDDDDNN 300 AVRPVGKTGG RGIGRSNRGG RGRSVGRGGR GGVTDDGGKS ATYWSTDEQM LLVRCKREQD 360 MHLAGLGHNY GQMRTKEWKW VDIAKRMANG GSPKDADDCM KKWDNLFQNY KKIQRFQNAS 420 GRPDFFKLSN DERKEHNFKF RMERVLYNEI HSGMLGNHTI FPPNITDTDS PDGVQLPRRG 480 ADGGESVDSE GGGDGCPEER SSARDSDVNA CSVAGGGKRK NARQQALETI ADVMDRHGEL 540 MSSTIESSSK RQ

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MADLQRRLPL LLLVVVVFLH VCLSCRPWKQ RRKRRASTKR AVLQEERPMA GMKAHAILPA  60
AEGGRRPATT EPSRRYDPSM YSHLPSWETP LPPSDEEPEG DELPTFPLAS GSTQLLSQTV  120
LVGGSASSEQ GEYTSLLQQG FSGGAREASR TVITAAHASA RGLQQPRREQ TGPSTVRGGA  180
SVVGGVRSSP TARQHVSSAP SGERLTDNWD VRTAAAAASL RTSGARSSML NRTTASPSEG  240
RDEGACRPPA GSGVSVENIT RGVSNMRAHS DGGDDDRCGG DDADDGFREE VEAGDDDDNN  300
AVRPVGKTGG RGIGRSNRGG RGRSVGRGGR GGVTDDGGKS ATYWSTDEQM LLVRCKREQD  360
MHLAGLGHNY GQMRTKEWKW VDIAKRMANG GSPKDADDCM KKWDNLFQNY KKIQRFQNAS  420
GRPDFFKLSN DERKEHNFKF RMERVLYNEI HSGMLGNHTI FPPNITDTDS PDGVQLPRRG  480
ADGGESVDSE GGGDGCPEER SSARDSDVNA CSVAGGGKRK NARQQALETI ADVMDRHGEL  540
MSSTIESSSK RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-07	Trihelix family protein