PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67091.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 705aa MW: 76570.6 Da PI: 8.9239

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.8	3.2e-14	450	521	2	66
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 W+ +++ aLi+a+r+ + +l+ r k ++ +W +v+++++ g+ r++++C++kw+nl +++kk+ + GBG67091.1 450 WSVEHIIALIRAKRDQDAHLQgmghayaRMKPREWKWNDVARRLKNVGVDRKQEKCRKKWDNLMQQFKKVHH 521 9***********7776666433333367899**********************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MSMPTVTVSG PVASPRCTLR CNSGLGFSRG GKPAKGRQMR IFEVAQRVQK TTASVCRQAR 60 VAVCRTSQLR CRPCSLPSSA VAVVRRMADS FRKLPLLLLD IFLLVVVVVL HMCFVGGAPR 120 RWRRRTSPMK AVRTDSGQGS HKGGGEQVVS RRAVGSSSPA CRLSLGVGHS SLPPHLQPLP 180 DSSDEEEREG RACTVPLGSG STQEWSWTEL CGGSGGVHGQ SFTELLAPGL DGEEGHGGSN 240 LSSGLSTGRS GSQTHTVIVN PHVGDDGGQL TAVDRSSKSA GAQQWQGRAT SISRSTQGRP 300 SFMQSPAPVC AASNLGRRRG IVEERGGYLD DVVDDLDGRL VWAEERRKIR EGREEAIRRG 360 VERLRMDRQA EEVEEPHAGL PSEDDDDDGV GEARDGNGSY ASPSQNGDRG GKGGKTKATS 420 GNGRGRPKKA QAKANDGEGD GDAEEKRNFW SVEHIIALIR AKRDQDAHLQ GMGHAYARMK 480 PREWKWNDVA RRLKNVGVDR KQEKCRKKWD NLMQQFKKVH HFQSPSGGID FFQLNGKERA 540 RHGFNFNMDR TVYDEIDGSS GFNETINPKN VVDTGARGGV HLPSMTTADP EAVGDADAGA 600 WGEDEDEGST RGSSQTSGSP HGFGKRKSTR QQTFEAMTEC MDKHGALMAA TMESANKRQC 660 SIQLRQCEAL EVEVQVQKTH YAASDEVSKL MCHALLEIAK AIRER

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MSMPTVTVSG PVASPRCTLR CNSGLGFSRG GKPAKGRQMR IFEVAQRVQK TTASVCRQAR  60
VAVCRTSQLR CRPCSLPSSA VAVVRRMADS FRKLPLLLLD IFLLVVVVVL HMCFVGGAPR  120
RWRRRTSPMK AVRTDSGQGS HKGGGEQVVS RRAVGSSSPA CRLSLGVGHS SLPPHLQPLP  180
DSSDEEEREG RACTVPLGSG STQEWSWTEL CGGSGGVHGQ SFTELLAPGL DGEEGHGGSN  240
LSSGLSTGRS GSQTHTVIVN PHVGDDGGQL TAVDRSSKSA GAQQWQGRAT SISRSTQGRP  300
SFMQSPAPVC AASNLGRRRG IVEERGGYLD DVVDDLDGRL VWAEERRKIR EGREEAIRRG  360
VERLRMDRQA EEVEEPHAGL PSEDDDDDGV GEARDGNGSY ASPSQNGDRG GKGGKTKATS  420
GNGRGRPKKA QAKANDGEGD GDAEEKRNFW SVEHIIALIR AKRDQDAHLQ GMGHAYARMK  480
PREWKWNDVA RRLKNVGVDR KQEKCRKKWD NLMQQFKKVH HFQSPSGGID FFQLNGKERA  540
RHGFNFNMDR TVYDEIDGSS GFNETINPKN VVDTGARGGV HLPSMTTADP EAVGDADAGA  600
WGEDEDEGST RGSSQTSGSP HGFGKRKSTR QQTFEAMTEC MDKHGALMAA TMESANKRQC  660
SIQLRQCEAL EVEVQVQKTH YAASDEVSKL MCHALLEIAK AIRER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	423	431	GRGRPKKAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-09	Trihelix family protein