PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67043.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1446aa MW: 156173 Da PI: 6.9572

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.8	2.1e-11	788	862	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aLi+arr m++++ r k ++ +We+v +++++ g++r + C +kw+nl +++kk+ + ++ GBG67043.1 788 WSVGDTIALIRARRdqdlyiaGMGTSFARMKTREWKWEDVRARLQSMGVTRDAFDCGKKWDNLMQQFKKVHKFQN 862 99999*******9999999999*******************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1446 aa Download sequence
MGLRVSSSMT MVTVMIVSMM MMGMPLRMIV AVGADMSWTA QQRGGNTVAG AESAYDDVGD 60 MQGARQLQVD TSLPSSLPSI AFYIINTTLL GAPRVVLTTT QLLRPTARNV ACFHFIRGVV 120 FSSQTGVFFY LQQDACFDGT AGRERNARSI HKCDMRGMAG SGPAQANSSL LTVEWGDDNG 180 NGTTRSDRHL VLPLLDKGLA FVNTTDGSRT TYELPKFKGY AGAFNPERTI FYVGNDTCVL 240 YSVMDGDSPG SFVNAFRSKS CYGDSRFLFG HRNFLQDGTY LYAWGMSNRT LLGVDLISGE 300 VDQVTEIPEI KELGLGGSVL TQDGCSLFVV AYAGKTIMRV AFDKPRGKVV TVENVTTYAS 360 GDGWLVTVAL DNDDSHLYVS TRTGQLFEFP INKLALGECI PTPYAPTSTE SSSSSSSPSP 420 SPSPSPSPPS AQSTGASPTA GPRGGVSVGV LAGSLVAACL VASVLGGAFV VFVSRSRKSA 480 MVESGGMTAR MDRRLGNGRP AGTTSGASNA GSLAKWPYDP RLYAGLPSHD IPLPPSDDEG 540 GDARSSTLPL GSGSTQEWAA TQSCGGGRVE TPWTYTSLLN EGLCDGDDNA AVDLSFQLSS 600 SSGAATMHTR IINPHPGVDW ADNTHGGVCG PRDGGLPQSL CEGGSKRNES TSTIGGGVCA 660 REHPEWMRLS PFVAERIRRS LCTAAAGGFA SGTQALHQRG TETITRGVQR LHEDEGDEAA 720 AEEARGCDDV DGGDDCNADD LPGIRPLGRK AMKGGATARK GPAAKSRRNK KMDDDTGRSD 780 GEGGRNFWSV GDTIALIRAR RDQDLYIAGM GTSFARMKTR EWKWEDVRAR LQSMGVTRDA 840 FDCGKKWDNL MQQFKKVHKF QNLSGGKDYF KIASKERRSE GFSFVMDQSV YDEMEAMTKG 900 DHTIHPKKLA DTGAAGGVQM SAGAGAVGDT MGSEGGGDAA DEEQGSTRDS TFSAGSGGGY 960 GKRKNMRQQT FEAVADVMEK HGALMASTMD SASKRQCSMM SRQCKILESE VEVKRKHYAA 1020 ADEANRMMHS HKRSLTEAEG MSTRGGARGK KRENIPADMQ GLERGQRHVP KAKRLRSEEP 1080 SASLPPRQGR TWTAANEEED DDVFTTEEEA AEENVTAPRG STLQRSGDQS GARRLATPPP 1140 EAQQVRAHNT QKAKEVVVDV GSEDDEPLES RRQRNVTQGG TATAGRKLYN IIHEMREYFV 1200 AIACGMQTPP VPRSVIMPKS STTVIRIADP AQLEQAIARA MAAKNIALRV LHRWVFKSGN 1260 RPRGFNVAFQ YALESVATDI ARVMWNGEEW SNVVSVPVCA HTIDMNMDLP LWFEGTNIED 1320 RPEDDDMAVH LESTVICMAH AFRAAVQMGG IVDGGFISHE RLSRIADRFR LMLAACMWLM 1380 RMAGDDARSQ YEVFYFAKLV AKPTLVASIH RAFDHRRSII RVTNATTERL GKVNATLGEY 1440 PKYIPD

Sequence ? help Back to Top

Protein Sequence Length: 1446 aa Download sequence

MGLRVSSSMT MVTVMIVSMM MMGMPLRMIV AVGADMSWTA QQRGGNTVAG AESAYDDVGD  60
MQGARQLQVD TSLPSSLPSI AFYIINTTLL GAPRVVLTTT QLLRPTARNV ACFHFIRGVV  120
FSSQTGVFFY LQQDACFDGT AGRERNARSI HKCDMRGMAG SGPAQANSSL LTVEWGDDNG  180
NGTTRSDRHL VLPLLDKGLA FVNTTDGSRT TYELPKFKGY AGAFNPERTI FYVGNDTCVL  240
YSVMDGDSPG SFVNAFRSKS CYGDSRFLFG HRNFLQDGTY LYAWGMSNRT LLGVDLISGE  300
VDQVTEIPEI KELGLGGSVL TQDGCSLFVV AYAGKTIMRV AFDKPRGKVV TVENVTTYAS  360
GDGWLVTVAL DNDDSHLYVS TRTGQLFEFP INKLALGECI PTPYAPTSTE SSSSSSSPSP  420
SPSPSPSPPS AQSTGASPTA GPRGGVSVGV LAGSLVAACL VASVLGGAFV VFVSRSRKSA  480
MVESGGMTAR MDRRLGNGRP AGTTSGASNA GSLAKWPYDP RLYAGLPSHD IPLPPSDDEG  540
GDARSSTLPL GSGSTQEWAA TQSCGGGRVE TPWTYTSLLN EGLCDGDDNA AVDLSFQLSS  600
SSGAATMHTR IINPHPGVDW ADNTHGGVCG PRDGGLPQSL CEGGSKRNES TSTIGGGVCA  660
REHPEWMRLS PFVAERIRRS LCTAAAGGFA SGTQALHQRG TETITRGVQR LHEDEGDEAA  720
AEEARGCDDV DGGDDCNADD LPGIRPLGRK AMKGGATARK GPAAKSRRNK KMDDDTGRSD  780
GEGGRNFWSV GDTIALIRAR RDQDLYIAGM GTSFARMKTR EWKWEDVRAR LQSMGVTRDA  840
FDCGKKWDNL MQQFKKVHKF QNLSGGKDYF KIASKERRSE GFSFVMDQSV YDEMEAMTKG  900
DHTIHPKKLA DTGAAGGVQM SAGAGAVGDT MGSEGGGDAA DEEQGSTRDS TFSAGSGGGY  960
GKRKNMRQQT FEAVADVMEK HGALMASTMD SASKRQCSMM SRQCKILESE VEVKRKHYAA  1020
ADEANRMMHS HKRSLTEAEG MSTRGGARGK KRENIPADMQ GLERGQRHVP KAKRLRSEEP  1080
SASLPPRQGR TWTAANEEED DDVFTTEEEA AEENVTAPRG STLQRSGDQS GARRLATPPP  1140
EAQQVRAHNT QKAKEVVVDV GSEDDEPLES RRQRNVTQGG TATAGRKLYN IIHEMREYFV  1200
AIACGMQTPP VPRSVIMPKS STTVIRIADP AQLEQAIARA MAAKNIALRV LHRWVFKSGN  1260
RPRGFNVAFQ YALESVATDI ARVMWNGEEW SNVVSVPVCA HTIDMNMDLP LWFEGTNIED  1320
RPEDDDMAVH LESTVICMAH AFRAAVQMGG IVDGGFISHE RLSRIADRFR LMLAACMWLM  1380
RMAGDDARSQ YEVFYFAKLV AKPTLVASIH RAFDHRRSII RVTNATTERL GKVNATLGEY  1440
PKYIPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	9e-09	Trihelix family protein