PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66968.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 910aa MW: 100333 Da PI: 6.7202

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.1	2.7e-09	111	185	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +re e +l r + k+ +W+++ k+m+ g + ++ C +kw+n+ + ykki++ ++ GBG66968.1 111 WSPEEQMQLVRCKREQEMHLAglghnygRMRTKEWKWDDIVKRMANAGWPKDAEDCMKKWDNIFQNYKKIQRFQN 185 9***********66666553333333778************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence
MPAQPDLRDD GTCRPVVRPA PTMENITRGV SNMRAHSDGG DDDGGGGDDA DERFREDVEA 60 GDDDDDIPFR PLGKTGGRGR GRSRGAVRGR SIGRGGRGGI NDDGGKSATY WSPEEQMQLV 120 RCKREQEMHL AGLGHNYGRM RTKEWKWDDI VKRMANAGWP KDAEDCMKKW DNIFQNYKKI 180 QRFQNASGRP DFFRLSNKER KEHNFKFRME RALYNEIHAD MVGNHTIFPP NIADTGSPDG 240 VQLPRRGAGA GKFVGSEGAG EGFPEECSTM RDSDNNAASG AGGGKRKNAC QQALESIADV 300 MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKAH YEASDETQRM MCHALMKIRS 360 SRNMSARGNA HGKKRDVVPD DSQGQGRGRW QAPKGKRVRS EDASARVPRR GAQGWAAAAE 420 GDYNEEFTTE EEQAEAARSE VRESGRQHSS DHTASKRMLT PPPEVQQLRG RETRTEKALV 480 VDLGGDDDEP LERRRIRIRT TATTATPPLA VTAHAAANER PVSVGAEEAG AAGAGGSGTV 540 AAVATAREEA AVVAMVREEA RGEKKGDREA GEPGSSRVRR SVMTKDLIDR VVLSVDDKAF 600 WTTGEGRRLY NIVHDTREYF VAIASGLLPP AVPRSVVLPK SSMRVGRIVD QSQMQQAISR 660 AAAVENVALR ILHGWVFKSG NRPRGYHVAF QYSQESFATD IARAMWCGEE WCDVDSPAVC 720 AHTIDLSMDL PLWFAGDNIQ DRPDDDDMAA HQESTVICVA HAFRAAVQMG ALIDGEFISH 780 DRLCRVVDCF GLLLAACTWI MRMVGDDPRS HYEAFYFVNL VAKPTLVVAM HRSFDHRRSV 840 VRAAKVVTER LGKANATFGQ YPDYIPQWAP CGIGFRHDAS ITRPEDAKKL DWLGPGPPDD 900 DNNNEGKDDA

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence

MPAQPDLRDD GTCRPVVRPA PTMENITRGV SNMRAHSDGG DDDGGGGDDA DERFREDVEA  60
GDDDDDIPFR PLGKTGGRGR GRSRGAVRGR SIGRGGRGGI NDDGGKSATY WSPEEQMQLV  120
RCKREQEMHL AGLGHNYGRM RTKEWKWDDI VKRMANAGWP KDAEDCMKKW DNIFQNYKKI  180
QRFQNASGRP DFFRLSNKER KEHNFKFRME RALYNEIHAD MVGNHTIFPP NIADTGSPDG  240
VQLPRRGAGA GKFVGSEGAG EGFPEECSTM RDSDNNAASG AGGGKRKNAC QQALESIADV  300
MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKAH YEASDETQRM MCHALMKIRS  360
SRNMSARGNA HGKKRDVVPD DSQGQGRGRW QAPKGKRVRS EDASARVPRR GAQGWAAAAE  420
GDYNEEFTTE EEQAEAARSE VRESGRQHSS DHTASKRMLT PPPEVQQLRG RETRTEKALV  480
VDLGGDDDEP LERRRIRIRT TATTATPPLA VTAHAAANER PVSVGAEEAG AAGAGGSGTV  540
AAVATAREEA AVVAMVREEA RGEKKGDREA GEPGSSRVRR SVMTKDLIDR VVLSVDDKAF  600
WTTGEGRRLY NIVHDTREYF VAIASGLLPP AVPRSVVLPK SSMRVGRIVD QSQMQQAISR  660
AAAVENVALR ILHGWVFKSG NRPRGYHVAF QYSQESFATD IARAMWCGEE WCDVDSPAVC  720
AHTIDLSMDL PLWFAGDNIQ DRPDDDDMAA HQESTVICVA HAFRAAVQMG ALIDGEFISH  780
DRLCRVVDCF GLLLAACTWI MRMVGDDPRS HYEAFYFVNL VAKPTLVVAM HRSFDHRRSV  840
VRAAKVVTER LGKANATFGQ YPDYIPQWAP CGIGFRHDAS ITRPEDAKKL DWLGPGPPDD  900
DNNNEGKDDA