PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG66894.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 341aa    MW: 37989 Da    PI: 7.171
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG66894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.71.7e-09116189268
    trihelix   2 WtkqevlaLiearremeerlrr.g......klkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ +e ++L++ +re e +l   g      + k+ +W++++k+m+  g  +    C +kw+nl + ykki++ +
  GBG66894.1 116 WSPEEKMQLVRCKREQEMHLAGlGhnygwmRTKEWKWDDIAKRMANVGRPKDTDDCMKKWDNLFQNYKKIQRFQ 189
                 9*************99988885322222336**************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPKRTTPTQP DLRDDSACRP VVRPTPTVEN ITRGVSNMRA HNDGGDDDGG GGDDADERFR  60
EDVEAGDDDD DIPIRPLGKT GGRGRGRSRG VVRGRSVGRG GRGDVSDDGG KSGTYWSPEE  120
KMQLVRCKRE QEMHLAGLGH NYGWMRTKEW KWDDIAKRMA NVGRPKDTDD CMKKWDNLFQ  180
NYKKIQRFQN ASGRPDFFGL SNEERKEHNF KFWIERALRG AGVGESVGSE AAGEGFPEER  240
SSTRDSDNNA ASGAVGGKRK NARQQALESI ADVMDRHGEL MSSTIESSSK RQCSIFTRQC  300
DILEQEVAVQ KAHYAASDET QRMMFHALME IVTAIRGRSA M