PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66802.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 894aa MW: 97515.8 Da PI: 6.1291

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.4	2.3e-10	254	327	2	68
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e l+L++ +r +++++rr + k +W++++k+m++ g + + C +kw+nl + ykki++ + GBG66802.1 254 WSPEEQLQLVRCKReqemhlaGLGHNYRRMRTKDWKWDDIAKRMASAGKPKDADDCMKKWDNLFQNYKKIQRFQ 327 9***********55555555555666889************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
MQGRVGAGAG QGGIRPATAE PPRRYDPSMY AHLQSWETQL PPSDKEPETQ ELPTLPLASG 60 STQLWSQTVR AGGSGCNEGG EYTSLLQHGL GDDDDGGLDL SAPASRLHST SVERSRSNWP 120 ARNGAAAGSP RVECARPSMP ERTTLTQSDV RDVGACGPPV RPVPTVENIT RGVSNMRAHS 180 DGGDDDGVGS DDADERLTED VDTEDDKEDI PVRPLGKTGG RGRARNKGVV RGRSVCRGSR 240 GCVSDDSGKS VTYWSPEEQL QLVRCKREQE MHLAGLGHNY RRMRTKDWKW DDIAKRMASA 300 GKPKDADDCM KKWDNLFQNY KKIQRFQNAS GRPDFFGLTN EERKEHNFKF RMERALYNEI 360 HAGMLGNHTI FPPNIADTGN LDGVQLPRRG GRGGESVSSE AGGEAFPEER SSARESENNA 420 GSGDGGGKRK NERQQALESI ADVMDRHGEL MSSTIESSSK RQCSIFMRQC DILDQEVAVQ 480 KKHYAVSNET QRMMCHALME IAAAILGVDA AGAAGAVAGV SGSAPPVPAA KEEGAVAAMA 540 RDDAHGEKRS DREGGEAGSN RPRRGVLSND LVDRAILWVD DKPYRTTGEG RRLYNIVHET 600 REYFVAIASG LPPPAIPRSI VMPKSSTRIA RIVDPSLLQQ ATSCASAVEN IALCVLHGWV 660 FKSRNRPRGY NLAFQYALES VATDIVRAMQ YGEEWCNVVS PAVCAHTIDL SMDLQLWFAG 720 VNVENKPDDD DMAVYQESTI ICAAHAFRVA VQMGAVIDGE FISHDRLCRV ADCFRLLLAA 780 CMWIMRMAGN DPGSHFEAFY FATLVSKSTL VASMHRSFDH RRSIGLAVKA ITERFGKANA 840 TFGEHPDYLP RWANSGIVFG HDARIDGLEE AKKLDRLGSG PVDDDNDDDG KGDA

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

MQGRVGAGAG QGGIRPATAE PPRRYDPSMY AHLQSWETQL PPSDKEPETQ ELPTLPLASG  60
STQLWSQTVR AGGSGCNEGG EYTSLLQHGL GDDDDGGLDL SAPASRLHST SVERSRSNWP  120
ARNGAAAGSP RVECARPSMP ERTTLTQSDV RDVGACGPPV RPVPTVENIT RGVSNMRAHS  180
DGGDDDGVGS DDADERLTED VDTEDDKEDI PVRPLGKTGG RGRARNKGVV RGRSVCRGSR  240
GCVSDDSGKS VTYWSPEEQL QLVRCKREQE MHLAGLGHNY RRMRTKDWKW DDIAKRMASA  300
GKPKDADDCM KKWDNLFQNY KKIQRFQNAS GRPDFFGLTN EERKEHNFKF RMERALYNEI  360
HAGMLGNHTI FPPNIADTGN LDGVQLPRRG GRGGESVSSE AGGEAFPEER SSARESENNA  420
GSGDGGGKRK NERQQALESI ADVMDRHGEL MSSTIESSSK RQCSIFMRQC DILDQEVAVQ  480
KKHYAVSNET QRMMCHALME IAAAILGVDA AGAAGAVAGV SGSAPPVPAA KEEGAVAAMA  540
RDDAHGEKRS DREGGEAGSN RPRRGVLSND LVDRAILWVD DKPYRTTGEG RRLYNIVHET  600
REYFVAIASG LPPPAIPRSI VMPKSSTRIA RIVDPSLLQQ ATSCASAVEN IALCVLHGWV  660
FKSRNRPRGY NLAFQYALES VATDIVRAMQ YGEEWCNVVS PAVCAHTIDL SMDLQLWFAG  720
VNVENKPDDD DMAVYQESTI ICAAHAFRVA VQMGAVIDGE FISHDRLCRV ADCFRLLLAA  780
CMWIMRMAGN DPGSHFEAFY FATLVSKSTL VASMHRSFDH RRSIGLAVKA ITERFGKANA  840
TFGEHPDYLP RWANSGIVFG HDARIDGLEE AKKLDRLGSG PVDDDNDDDG KGDA