PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66249.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 981aa MW: 105062 Da PI: 5.4383

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.8	3.8e-10	296	369	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e l+L++ +re e +l + + k +W++++k+m++ g + + C +kw+nl + ykki++ + GBG66249.1 296 WSPEEQLQLVRCKREQEMHLAglghnygQMRTKDWKWDDIAKRMASAGKPKDADDCMKKWDNLFQNYKKIQRFQ 369 ************77777763333222567999*********************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence
MAGMQGRAGV GVGQGGIRPA TAEPPRRYDL SMYAHLQSWE TPLPPSDEEP ETEELPTLPL 60 ASGSTQLWSQ TVRAGGSGCN EGGEYTSLLQ QGLGDDDDGG LDLRFGSCSG GSKEASRTLI 120 IDTDPSPRGV EQGGSQRTDQ TTLCARASVA ASVGPSAVLR RQGSTAPSAD RSTSNWPARN 180 GAAAGSPRVE CARPSMPERT TPTQSDVRDA GACRPPVRPV PTVENITRGV SNMRAHSDGG 240 DDDGVGGDDA DKRLMEDVDA GDDDEDIPVR PLGKTGGRGE HAAGVLDDAG KSVTYWSPEE 300 QLQLVRCKRE QEMHLAGLGH NYGQMRTKDW KWDDIAKRMA SAGKPKDADD CMKKWDNLFQ 360 NYKKIQRFQN ASGRPDFFGL TNEERKEHNF KFRMERALYN EIHAGMLGNH TNFPPNIADT 420 GNPDGRQLPR RGGGGGESVG SEAGGEGFPE ERSSARESEN NAGSGAGGGK RKNARQQVSE 480 SIADVMDRHG ELMSSTIESS SKQQCSIFTR QCDILEQEVA VQKEHYAASN ETQRMMCHAL 540 MEIAAKRLRS DDASTRVPLG GAQGWAAEVG GDYDDDFATG EDQAQATTSG VRESRGQRQS 600 HHSASKRLMT PPPDTKQVRA RDRRTDNADV HDVGDDDDEP LERRHLRSHT AGTPPPAASG 660 HALAGETTVT GRLPAITAAP RPRNTAAEGG SVQRGGGGVV AAHAGAVGVE AAGAAGAVAG 720 VSGSAPPVPA AKEEGAVVAM ARDDARGEKR SDREGGEGGS NRPRRGVLSN DLVDCVVLSV 780 DDKPFWTMGE GRRLYNIVHE TREYFVAIAS GLPPPAIPRS VVMPKSITRI ARIADPSQLQ 840 QATSHASAVE NIALCVLHGW VFKSVNRPRG YNLAFQYALE SVATDIVRAM WYGEEWCNVV 900 SPAVCAHTID LSMDLPLWFA GVNVENRPDD DDMAAYQEST IICVAHAFRK AVQMGAVIDG 960 EFISHDRLCR VADCFRLLLV A

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence

MAGMQGRAGV GVGQGGIRPA TAEPPRRYDL SMYAHLQSWE TPLPPSDEEP ETEELPTLPL  60
ASGSTQLWSQ TVRAGGSGCN EGGEYTSLLQ QGLGDDDDGG LDLRFGSCSG GSKEASRTLI  120
IDTDPSPRGV EQGGSQRTDQ TTLCARASVA ASVGPSAVLR RQGSTAPSAD RSTSNWPARN  180
GAAAGSPRVE CARPSMPERT TPTQSDVRDA GACRPPVRPV PTVENITRGV SNMRAHSDGG  240
DDDGVGGDDA DKRLMEDVDA GDDDEDIPVR PLGKTGGRGE HAAGVLDDAG KSVTYWSPEE  300
QLQLVRCKRE QEMHLAGLGH NYGQMRTKDW KWDDIAKRMA SAGKPKDADD CMKKWDNLFQ  360
NYKKIQRFQN ASGRPDFFGL TNEERKEHNF KFRMERALYN EIHAGMLGNH TNFPPNIADT  420
GNPDGRQLPR RGGGGGESVG SEAGGEGFPE ERSSARESEN NAGSGAGGGK RKNARQQVSE  480
SIADVMDRHG ELMSSTIESS SKQQCSIFTR QCDILEQEVA VQKEHYAASN ETQRMMCHAL  540
MEIAAKRLRS DDASTRVPLG GAQGWAAEVG GDYDDDFATG EDQAQATTSG VRESRGQRQS  600
HHSASKRLMT PPPDTKQVRA RDRRTDNADV HDVGDDDDEP LERRHLRSHT AGTPPPAASG  660
HALAGETTVT GRLPAITAAP RPRNTAAEGG SVQRGGGGVV AAHAGAVGVE AAGAAGAVAG  720
VSGSAPPVPA AKEEGAVVAM ARDDARGEKR SDREGGEGGS NRPRRGVLSN DLVDCVVLSV  780
DDKPFWTMGE GRRLYNIVHE TREYFVAIAS GLPPPAIPRS VVMPKSITRI ARIADPSQLQ  840
QATSHASAVE NIALCVLHGW VFKSVNRPRG YNLAFQYALE SVATDIVRAM WYGEEWCNVV  900
SPAVCAHTID LSMDLPLWFA GVNVENRPDD DDMAAYQEST IICVAHAFRK AVQMGAVIDG  960
EFISHDRLCR VADCFRLLLV A