PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66092.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 472aa MW: 52096.6 Da PI: 6.9351

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.2	1.4e-10	382	436	18	74
trihelix 18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 ++++ r k k+ +W ++s++mr++g+ r C ++wen+ + ykk+ e+ek+ + GBG66092.1 382 GRNFARMKMKEWKWTDISNRMRQQGVMRDWDSCMKRWENVIGHYKKVLEREKES--G 436 567889999****************************************99983..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MRQCCVSLHD RCCAEEQTGR LQCPGAVVCV LRHGSSESRG QHKVHDHGGC VRCPLPCCRV 60 LMTQVRMADL LRKTALLALL LFALLAVLVV QLWQLGRRAA VQRRPKSSKK KVRFVGAEKS 120 MGDYRSGAGR EHGMEGAGFT SGTDVQEHRF DPALYSHLPS WQQPLPDDNH WEPPLSTLPL 180 GWGSTQTSYD TVGIPHRRAS SMGPMSALLG EVREGGGHPL DLHLSPSCSM HVSRTLIVDH 240 SSDGRRPMTV ATDVPTKGLS SVSVNRQQEV AMKDIGAAAV DSVQRGVTGG TTAAESPPVI 300 EGIIARVSNM RATGQGEQGG VGNAGCEEEG EVDGDDEDDS DTDEEEEDGV QEVTTRGGKK 360 KGSNGHGKLE EGYQEDYLTN AGRNFARMKM KEWKWTDISN RMRQQGVMRD WDSCMKRWEN 420 VIGHYKKVLE REKESGVESF FTQTPKQRKQ LGYKFTMDRM VYDAIDGMQQ DN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MRQCCVSLHD RCCAEEQTGR LQCPGAVVCV LRHGSSESRG QHKVHDHGGC VRCPLPCCRV  60
LMTQVRMADL LRKTALLALL LFALLAVLVV QLWQLGRRAA VQRRPKSSKK KVRFVGAEKS  120
MGDYRSGAGR EHGMEGAGFT SGTDVQEHRF DPALYSHLPS WQQPLPDDNH WEPPLSTLPL  180
GWGSTQTSYD TVGIPHRRAS SMGPMSALLG EVREGGGHPL DLHLSPSCSM HVSRTLIVDH  240
SSDGRRPMTV ATDVPTKGLS SVSVNRQQEV AMKDIGAAAV DSVQRGVTGG TTAAESPPVI  300
EGIIARVSNM RATGQGEQGG VGNAGCEEEG EVDGDDEDDS DTDEEEEDGV QEVTTRGGKK  360
KGSNGHGKLE EGYQEDYLTN AGRNFARMKM KEWKWTDISN RMRQQGVMRD WDSCMKRWEN  420
VIGHYKKVLE REKESGVESF FTQTPKQRKQ LGYKFTMDRM VYDAIDGMQQ DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-07	Trihelix family protein