PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65933.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1240aa MW: 139020 Da PI: 5.8281

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.5	8.2e-09	344	419	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e ++L++ +re e +l r + k+ +W +++k+m+ +g + + C +k +nl + ykki+++++ GBG65933.1 344 WSTDEQMLLVRCKREQEMQLAglghnygRMRTKEWKWVDIAKRMANGGSPKDADDCMKKSDNLFQNYKKIQRIQNA 419 ************77777764443333678*************************************998775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1240 aa Download sequence
MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQRRKRR ASTKRVVLQE ERPMAGMKAR 60 AILPAAEGGR RPATTEPSRR YDPSMYSHLP SWETPLPPSN EEPEGEELPT FPLGSGSTQL 120 LSQTVLVDGS ASNERGEYTS LLQQGLGDDD DGGVDLRIGL SSGGAREASR TFITAAHASA 180 RGLQQPRREQ MGPSTVRGGA SVVGGVGSSP SPEACIGSVL AHQRCTLVNV EPNNGRATRR 240 EGRGRLQTTG GLGTSVENIT RGVSNMRAHN DAGDDDGCGG DDAADGFREE VEAGDDDDDN 300 VVRPVGKTGG RGIGRSNRGG RGRSVGRDGR GGVTDDGGKS ATYWSTDEQM LLVRCKREQE 360 MQLAGLGHNY GRMRTKEWKW VDIAKRMANG GSPKDADDCM KKSDNLFQNY KKIQRIQNAS 420 GRLDFFKLSN DERKEHNFKF RMERVLQESV IKNLKKEFEE GGLVLGVPDH AAVMTRPFIV 480 ETDAGPTALG GVLIQQDPNG EERPLRFESW TLNTSERNYS QFKRETLAVL HYLRIFRNYL 540 FGNRFVLRVD ATALAGSLKN FAPSDPTIAR WLAYIWMFDF ELKRIPGTKN MVDGLSRVDW 600 DKNHQGVIED TPPVDGFLDS EEDVRLHINS WALAVGKYVA PGRPVWLAPP GHVGRPDLVL 660 KPYIEEDSWG MSDVGWMMEL ALAGKYELQE DPLTIENGAL QVGKHGKMIG GVYLLANALL 720 QEETVRNEVL DQEEEIEPGG GDNVIHEREN GDFEEGEIKE AFRAEEYEGV YLKLGMLLSC 780 EMRERDACAR VLKMRPSFLV RDGHLFMRSK GRNPRRVVCG VARQIDIMVA LHDEPDIPHE 840 PHTQELREEP SVDEKELDRE ERAARELEIR TQLRKTNLAE LHERMQQGQA PEEVEDRKGK 900 STCTQEEDPP LFSEVWMGFD KLMDTTGRSG GQHQEIGVKL VSTDLLNLRS EMREGFTVAR 960 TSDQKIGDRL TKVAQKAYGQ RVDWEREAEG LKRELGRQGK ELAAVKADME RVSTENEAVR 1020 QVNQTLNKVT DALRAYLCAQ LTFFQVQKFE IREQPAEEVF KREREVEMAD QQDGEEIPLI 1080 DKEMLEQPGV LVEKGAEVGE FEWRLPAGLT LGHEPAVPQK GPPVEAMRVG EVPPTIRKAI 1140 VGQQEGQESV GQTMVGTRQR VDLRDCQEST MLQKVLQICR MYWDLGPLGQ GQRGVLGSWG 1200 CQQMTEQPAP LPQGSHSRRL RARSQLEQPR HLYPRWKERR

Sequence ? help Back to Top

Protein Sequence Length: 1240 aa Download sequence

MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQRRKRR ASTKRVVLQE ERPMAGMKAR  60
AILPAAEGGR RPATTEPSRR YDPSMYSHLP SWETPLPPSN EEPEGEELPT FPLGSGSTQL  120
LSQTVLVDGS ASNERGEYTS LLQQGLGDDD DGGVDLRIGL SSGGAREASR TFITAAHASA  180
RGLQQPRREQ MGPSTVRGGA SVVGGVGSSP SPEACIGSVL AHQRCTLVNV EPNNGRATRR  240
EGRGRLQTTG GLGTSVENIT RGVSNMRAHN DAGDDDGCGG DDAADGFREE VEAGDDDDDN  300
VVRPVGKTGG RGIGRSNRGG RGRSVGRDGR GGVTDDGGKS ATYWSTDEQM LLVRCKREQE  360
MQLAGLGHNY GRMRTKEWKW VDIAKRMANG GSPKDADDCM KKSDNLFQNY KKIQRIQNAS  420
GRLDFFKLSN DERKEHNFKF RMERVLQESV IKNLKKEFEE GGLVLGVPDH AAVMTRPFIV  480
ETDAGPTALG GVLIQQDPNG EERPLRFESW TLNTSERNYS QFKRETLAVL HYLRIFRNYL  540
FGNRFVLRVD ATALAGSLKN FAPSDPTIAR WLAYIWMFDF ELKRIPGTKN MVDGLSRVDW  600
DKNHQGVIED TPPVDGFLDS EEDVRLHINS WALAVGKYVA PGRPVWLAPP GHVGRPDLVL  660
KPYIEEDSWG MSDVGWMMEL ALAGKYELQE DPLTIENGAL QVGKHGKMIG GVYLLANALL  720
QEETVRNEVL DQEEEIEPGG GDNVIHEREN GDFEEGEIKE AFRAEEYEGV YLKLGMLLSC  780
EMRERDACAR VLKMRPSFLV RDGHLFMRSK GRNPRRVVCG VARQIDIMVA LHDEPDIPHE  840
PHTQELREEP SVDEKELDRE ERAARELEIR TQLRKTNLAE LHERMQQGQA PEEVEDRKGK  900
STCTQEEDPP LFSEVWMGFD KLMDTTGRSG GQHQEIGVKL VSTDLLNLRS EMREGFTVAR  960
TSDQKIGDRL TKVAQKAYGQ RVDWEREAEG LKRELGRQGK ELAAVKADME RVSTENEAVR  1020
QVNQTLNKVT DALRAYLCAQ LTFFQVQKFE IREQPAEEVF KREREVEMAD QQDGEEIPLI  1080
DKEMLEQPGV LVEKGAEVGE FEWRLPAGLT LGHEPAVPQK GPPVEAMRVG EVPPTIRKAI  1140
VGQQEGQESV GQTMVGTRQR VDLRDCQEST MLQKVLQICR MYWDLGPLGQ GQRGVLGSWG  1200
CQQMTEQPAP LPQGSHSRRL RARSQLEQPR HLYPRWKERR