PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG65540.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 534aa    MW: 56568.5 Da    PI: 9.1044
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG65540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.48.6e-09282354268
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ +e l+L ++ +e++  + +++       + ++We+v+ ++ e g++r+++ C++k  +l k+ ++i++  
  GBG65540.1 282 WSLEERLDLTKFASEDDALMADAEgaqacmTRSKRWEWVAGRLGEIGYSRTAEDCRKKSAELVKKVREIRDAC 354
                 99999999999999999999987666677799*********************************99999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MHVVRHLRCR TVPWPSVGRR VHGLAGDFMR RRFVADVQPL WGRGRCVGVP LHKSISSIRR  60
ALSTHVPSLG AVEVGSVVRA VRPNIRSVIG RSFLPEANDI THAVERCGGR GQIVEKGLRE  120
RDVAVAGTVY ARPNVAHPPL STDTTAAQDC VLGGGRACPC PCLRDSTGTT VIVIDVGDVR  180
GGVLVRARDI DSGTKKARAS PSDATTGFPG NTAGETGEAG VEGPGMGNRG ERAEKDDDDG  240
TTSTAADKIN EGVGDRTRPR PAGGRKRKGG SSPRPPKKNN PWSLEERLDL TKFASEDDAL  300
MADAEGAQAC MTRSKRWEWV AGRLGEIGYS RTAEDCRKKS AELVKKVREI RDACEGSGKQ  360
AYRDTTTEQR RMLGVSLTFE RQLWDAMEWS RLKKSVTCDD TLASEDLRGG GSPIGGEAGS  420
EGGGTDASDT ATKTRRTSSG KARGGDSLAS MYGMASVMEE STRALCEGLD KAASTLARAS  480
TDGSRMVATE IGAVAGAMRK GNAILEMLVG VMATRGARSG RGADDSCDTD PSTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260268RPAGGRKRK