PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65290.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 853aa MW: 87608.9 Da PI: 7.3464

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.6e-10	749	794	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ +L ellP + K++ a++L +A++Y++ Lq GBG65290.1 749 HSIAERIRRERISERLRKLHELLPIS-----DKVDTATMLDEAIQYVRRLQ 794 99*********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MMLNLHVFIA YMRKSRFPAL LGKPVQIQEF NPTLFAISQW TVVLGRPLGM RFISAFGSDR 60 SMLPQSPFLV LPSSPLQGSS SLEGPGIHGG GGGGSGAGTV GMSPGGVMGL SSQHGQTLQG 120 LRGQGAQLYG AQLGSSWQTP QSSLHQSDMI SYYVPTFGSS GQGSGVPGGS GGGPGSGGGA 180 RSGGGGPGSP SGGSTSGLGI PSLGGLGFSP LPSLSAPVPV SGPTGPSPAE VTLRLFPEAG 240 GRPGGGGIPQ SPSPQSHLQQ QQDTPVGISC RSPGMGMGPA HSRGSSGIPP HMGAGDRMGG 300 ESTPPASPGL QQLHVLSPMV RVGDPGAVAG GSSYNWSRVF DLPKYWTGEG NVVSLSEGHT 360 EKGLDLTVIV KGEEDEVEQQ QQHQQQQQPP QQPQHPQQAH QQQQGAKRLS AVLGMEPGLG 420 RMRGERESDR GRGDARQMPF SGVGLGGQGY FGSGGREGQC RRGESASSQL ASGSPGSGSG 480 GMMMPMSIYS PAAQSPGGSF SSVGAGAQPG GGGHDSPVGP SAGGFSGHVR ELYPPNTGER 540 TLGSFLPQQP EQRSVLDAGG LGMGNLWMGS SGLRFPQGPI GRSRTLLEVD VKARLGIATG 600 EETATRSPQL GIGPRAQLGM TGEREGPGAA AALLTGLLSQ SSREEEEGPR EHTIWQLEGM 660 MGAGAGVLGS GGEKKRPREI DVEEGSSSLG GGPLGSVVEV PHGGGAMEGG GQMGPVGTGG 720 PGMAPQGEVQ TVQEVPKRRA KRGQATDPHS IAERIRRERI SERLRKLHEL LPISDKVDTA 780 TMLDEAIQYV RRLQGQVQVS PLNGLIPEET IVPSSSNKSN SNVLRIAENY SSKFQISYSL 840 ALMYDEICDK VST

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MMLNLHVFIA YMRKSRFPAL LGKPVQIQEF NPTLFAISQW TVVLGRPLGM RFISAFGSDR  60
SMLPQSPFLV LPSSPLQGSS SLEGPGIHGG GGGGSGAGTV GMSPGGVMGL SSQHGQTLQG  120
LRGQGAQLYG AQLGSSWQTP QSSLHQSDMI SYYVPTFGSS GQGSGVPGGS GGGPGSGGGA  180
RSGGGGPGSP SGGSTSGLGI PSLGGLGFSP LPSLSAPVPV SGPTGPSPAE VTLRLFPEAG  240
GRPGGGGIPQ SPSPQSHLQQ QQDTPVGISC RSPGMGMGPA HSRGSSGIPP HMGAGDRMGG  300
ESTPPASPGL QQLHVLSPMV RVGDPGAVAG GSSYNWSRVF DLPKYWTGEG NVVSLSEGHT  360
EKGLDLTVIV KGEEDEVEQQ QQHQQQQQPP QQPQHPQQAH QQQQGAKRLS AVLGMEPGLG  420
RMRGERESDR GRGDARQMPF SGVGLGGQGY FGSGGREGQC RRGESASSQL ASGSPGSGSG  480
GMMMPMSIYS PAAQSPGGSF SSVGAGAQPG GGGHDSPVGP SAGGFSGHVR ELYPPNTGER  540
TLGSFLPQQP EQRSVLDAGG LGMGNLWMGS SGLRFPQGPI GRSRTLLEVD VKARLGIATG  600
EETATRSPQL GIGPRAQLGM TGEREGPGAA AALLTGLLSQ SSREEEEGPR EHTIWQLEGM  660
MGAGAGVLGS GGEKKRPREI DVEEGSSSLG GGPLGSVVEV PHGGGAMEGG GQMGPVGTGG  720
PGMAPQGEVQ TVQEVPKRRA KRGQATDPHS IAERIRRERI SERLRKLHEL LPISDKVDTA  780
TMLDEAIQYV RRLQGQVQVS PLNGLIPEET IVPSSSNKSN SNVLRIAENY SSKFQISYSL  840
ALMYDEICDK VST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	247	GGRPGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	4e-14	bHLH family protein