PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG64168.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Dof

Protein Properties

Length: 985aa MW: 98463.8 Da PI: 5.3825

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG64168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.1e-38	326	386	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ka++cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG+lrnvPvG+grrknk+s+ GBG64168.1 326 PDKAVACPRCESFDTKFCYYNNYNVNQPRHFCKGCQRYWTAGGTLRNVPVGAGRRKNKHSQ 386 6899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MEAEVKSPGS GDQQGGQQQN SDPGIKLFGR MIAVNFYNRS DIDYYSQEGG RGGGGVSGGQ 60 STAAVADCRA VSEEETPEAA QATEAAVGAG VGTATIEQGM EDGRVSGGDA GMTTAPCSLT 120 MSFARARAQG AGYNMVPSGG GGGGGCGGMG WGCGGGGGSA EKVAVGKGQP EGCGELHDEE 180 RRPNDRSFDR DRRMGSGVLP SEEAGSSSGS NSGSDDGNFE AGNGTQSMAP GGVTVMSGGH 240 AIEGRGENIP TTSMGQGRGE EMTVNGLGLD SSGGKGCGRS EGLTGSTGMR MVGMDGEGEE 300 GGSEKVDGGI SSGGGLCTSQ EKTKRPDKAV ACPRCESFDT KFCYYNNYNV NQPRHFCKGC 360 QRYWTAGGTL RNVPVGAGRR KNKHSQQKSA NGQANVSSGG NPARNSCGTA SAGIGSVSGT 420 VPGPGSSSGF PNSSVPGCVR LEVEDEVSPS GMTSELGRAD GAPTRFPAGT NCGVARPIPT 480 SALPAGLGIM GLGRGLVAEE TTSLQYGVFQ QLQGLTAPPV LPGGAVEGFG VPGLGIPGSG 540 VEGLLGPDVR RKKQKTRRLQ QGVTPTGLAT PVSETLGSNE EEESAAVARG FCAVRETTDA 600 STCTSSMANT SVCMSSVSSL NADGERMNDL TGPSMMPSQV GVQGSSVWGP PPPPSVGLVR 660 GPGGMQVDSL GVSMGMFKTP GMEAGELASA AASAGAGVWP SVTPTAAAMH ASPGTWGPAS 720 TGSPYGYFSG AWPFGYHLGW NGHHGGAMAG AGPAASGAAG WASTGLWPGG WAGLSPSSPW 780 GAAAGWGSLW GMPWANAAAA AAVANASAGV SPASVLGKHM RDGGAAVMMG KQTVDDANCL 840 VGPSVGNPPA GMLSPTGQFK PKGLHEATEG RNRGVGEDGG SEEGVMEGGG DMGGMVWAPK 900 LLRTGDGVHG DGRIGGWSAG KGLSGPTSGL GSMFRAFNGG MPKAPRFENS SSPVSFEKRL 960 FSPDQNARLA NPASIPRSMA FQESN

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MEAEVKSPGS GDQQGGQQQN SDPGIKLFGR MIAVNFYNRS DIDYYSQEGG RGGGGVSGGQ  60
STAAVADCRA VSEEETPEAA QATEAAVGAG VGTATIEQGM EDGRVSGGDA GMTTAPCSLT  120
MSFARARAQG AGYNMVPSGG GGGGGCGGMG WGCGGGGGSA EKVAVGKGQP EGCGELHDEE  180
RRPNDRSFDR DRRMGSGVLP SEEAGSSSGS NSGSDDGNFE AGNGTQSMAP GGVTVMSGGH  240
AIEGRGENIP TTSMGQGRGE EMTVNGLGLD SSGGKGCGRS EGLTGSTGMR MVGMDGEGEE  300
GGSEKVDGGI SSGGGLCTSQ EKTKRPDKAV ACPRCESFDT KFCYYNNYNV NQPRHFCKGC  360
QRYWTAGGTL RNVPVGAGRR KNKHSQQKSA NGQANVSSGG NPARNSCGTA SAGIGSVSGT  420
VPGPGSSSGF PNSSVPGCVR LEVEDEVSPS GMTSELGRAD GAPTRFPAGT NCGVARPIPT  480
SALPAGLGIM GLGRGLVAEE TTSLQYGVFQ QLQGLTAPPV LPGGAVEGFG VPGLGIPGSG  540
VEGLLGPDVR RKKQKTRRLQ QGVTPTGLAT PVSETLGSNE EEESAAVARG FCAVRETTDA  600
STCTSSMANT SVCMSSVSSL NADGERMNDL TGPSMMPSQV GVQGSSVWGP PPPPSVGLVR  660
GPGGMQVDSL GVSMGMFKTP GMEAGELASA AASAGAGVWP SVTPTAAAMH ASPGTWGPAS  720
TGSPYGYFSG AWPFGYHLGW NGHHGGAMAG AGPAASGAAG WASTGLWPGG WAGLSPSSPW  780
GAAAGWGSLW GMPWANAAAA AAVANASAGV SPASVLGKHM RDGGAAVMMG KQTVDDANCL  840
VGPSVGNPPA GMLSPTGQFK PKGLHEATEG RNRGVGEDGG SEEGVMEGGG DMGGMVWAPK  900
LLRTGDGVHG DGRIGGWSAG KGLSGPTSGL GSMFRAFNGG MPKAPRFENS SSPVSFEKRL  960
FSPDQNARLA NPASIPRSMA FQESN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	55	GGRGGGG
2	547	554	PDVRRKKQ
3	551	557	RKKQKTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	7e-35	Dof family protein