PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63828.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 593aa MW: 63273.4 Da PI: 5.8983

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.6	1.8e-09	214	287	2	68
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ + l+L++ +r + ++++r k k +We+++k+m+ g + +C +kw+nl + ykki++ + GBG63828.1 214 WSTEDQLLLVRSKRgqnmhlaGLAHNYGRMKTKDWKWEDIAKRMANAGRPKDVDECIKKWDNLFQNYKKIQRFQ 287 7777777777777766666666677778899**************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MLSQTVRVHG SVSNEGGEFA SLLRPGLGNE DDEGLHLRFG LSSGSTREVT HTFIVDVDPS 60 PRGIQRCGSQ HAEKTTLRGG ASVTAAVGPS PPTRQHGSTA ASAERMTSTC PVRSGITAGS 120 PLFDGGQSSM ANRTTLTQAD ARDEPACKTP VRPGPTVENI TLGVSNMRAH SDGGDDNTDG 180 GDDADEGLRT DVEPGDDDED IQIRDDGGKS VTYWSTEDQL LLVRSKRGQN MHLAGLAHNY 240 GRMKTKDWKW EDIAKRMANA GRPKDVDECI KKWDNLFQNY KKIQRFQNAS GMADFFRLSN 300 EERKENNFKF RMDRVLYNEI HGGMLGNHTI FPPNVADTGS PDGVQLPRQG ATGGESVGSE 360 AGGDGCPEEL PLARDSDNNA GTHEQTGGGL GGGCNVAKAK WSRQDAASVS GTKVEGDGWG 420 RPGDNDDNDV FTNPDAEIPP PVMPANVHER PPAPSLVART HTLRIINTDV NEVVRVDNGQ 480 GDAMIAPVTT PQGRNRPVAG IGPSATTQEG AMAATSRKQV AGDECGSGGV RNAGAAGDQA 540 QTRLAGVDVD HVEGTPRGTG EEDRRHRSSR VWTKKKRRTM TNRSCAGSAR AEW

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MLSQTVRVHG SVSNEGGEFA SLLRPGLGNE DDEGLHLRFG LSSGSTREVT HTFIVDVDPS  60
PRGIQRCGSQ HAEKTTLRGG ASVTAAVGPS PPTRQHGSTA ASAERMTSTC PVRSGITAGS  120
PLFDGGQSSM ANRTTLTQAD ARDEPACKTP VRPGPTVENI TLGVSNMRAH SDGGDDNTDG  180
GDDADEGLRT DVEPGDDDED IQIRDDGGKS VTYWSTEDQL LLVRSKRGQN MHLAGLAHNY  240
GRMKTKDWKW EDIAKRMANA GRPKDVDECI KKWDNLFQNY KKIQRFQNAS GMADFFRLSN  300
EERKENNFKF RMDRVLYNEI HGGMLGNHTI FPPNVADTGS PDGVQLPRQG ATGGESVGSE  360
AGGDGCPEEL PLARDSDNNA GTHEQTGGGL GGGCNVAKAK WSRQDAASVS GTKVEGDGWG  420
RPGDNDDNDV FTNPDAEIPP PVMPANVHER PPAPSLVART HTLRIINTDV NEVVRVDNGQ  480
GDAMIAPVTT PQGRNRPVAG IGPSATTQEG AMAATSRKQV AGDECGSGGV RNAGAAGDQA  540
QTRLAGVDVD HVEGTPRGTG EEDRRHRSSR VWTKKKRRTM TNRSCAGSAR AEW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	574	578	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-07	Trihelix family protein