PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63757.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 947aa MW: 102700 Da PI: 6.5947

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.9	6.2e-09	256	330	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + +L++a+r ++++++ k ++ +We+v +++e g+ r+++ C +kw+n +++kk+ + ++ GBG63757.1 256 WSVGDTVTLVRAKRdqdlyiaSLGTSFAHMKTAAWKWEDVRVRLQEMGVMRNAVDCGKKWDNWMQQFKKVHKFQN 330 8888899999999977777777888888899**************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence
MCTGAEVRKG ALLWQWAHDG QSRAAGCRRG DGDGGLQVGG ACSGESGVLR GAVDLSFHLL 60 SSCGAAATHT RIINSHLGGD CADNTPSVGG GDRNNSSPSV GGGDRNNSSP SVNGGIGARK 120 RLNWMRLSPV ARSGPGGTRG RQPAEDLIGG VPDVQRDDRQ VWAECRQELH RGETETITRG 180 VQRLHVDEVE DTAVDEGQGC DDVDGEDGCK SDDLPDIKPL GRRATRGGSG AKKGPATKPR 240 RTKNMDNDGK GGRNFWSVGD TVTLVRAKRD QDLYIASLGT SFAHMKTAAW KWEDVRVRLQ 300 EMGVMRNAVD CGKKWDNWMQ QFKKVHKFQN LSGGKDYFRL ASSDEGCRRL QACFEIGGLQ 360 LRHGPERVGG GGGTMGGDGG GETTDEEQGS TKDSSFSAGS GGGYGKRKNM RQQTFEAVAD 420 VMEKHVGRRH VPKSKRLRSE EPSPSVPVLR GRYWAATNED ENDDVFMTEE EAADDTVAAP 480 RGSTLQAKND QVAARRLLTP PPEGQQGRGQ RNTKAKEVVV DVGDEDNEPL ESRRQRNAMQ 540 CATVTGVRIC AAQEERPPQG AMSSTPSQPR PRNTAVDEGF TECGGGEVAQ QEARVASAGA 600 GAGSSGNVGV VAGARKEVPV VEREVARGEN KGERGDDDPL LSRERRGGLA RDLADRARLW 660 VDDKAFWTTG EGRRLYDIVH RTREHFEAIA SRVQAPVVSR SVVMPKSATS LTRIADPAQL 720 QQAIIRGGAA ENIVLLVLHG PCARYVVWRG VEQRGECAHT IDLNMDLPLW FAGVNIDDRP 780 EDDDMVAYQE STVLCVANAF RTAVQMGANV DDGFISHDRL SRIADCFRLL LAACMWLMRM 840 AGDDHRSHYE AFYFAQLVAK PTLIASMHRA FDYRRSVIRA TNVVTERLGK VNATFGEYPK 900 FIPDWASCGI KFGHDASIMG PEDAKKRDWL GSGPLEEDGD DNGENDA

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence

MCTGAEVRKG ALLWQWAHDG QSRAAGCRRG DGDGGLQVGG ACSGESGVLR GAVDLSFHLL  60
SSCGAAATHT RIINSHLGGD CADNTPSVGG GDRNNSSPSV GGGDRNNSSP SVNGGIGARK  120
RLNWMRLSPV ARSGPGGTRG RQPAEDLIGG VPDVQRDDRQ VWAECRQELH RGETETITRG  180
VQRLHVDEVE DTAVDEGQGC DDVDGEDGCK SDDLPDIKPL GRRATRGGSG AKKGPATKPR  240
RTKNMDNDGK GGRNFWSVGD TVTLVRAKRD QDLYIASLGT SFAHMKTAAW KWEDVRVRLQ  300
EMGVMRNAVD CGKKWDNWMQ QFKKVHKFQN LSGGKDYFRL ASSDEGCRRL QACFEIGGLQ  360
LRHGPERVGG GGGTMGGDGG GETTDEEQGS TKDSSFSAGS GGGYGKRKNM RQQTFEAVAD  420
VMEKHVGRRH VPKSKRLRSE EPSPSVPVLR GRYWAATNED ENDDVFMTEE EAADDTVAAP  480
RGSTLQAKND QVAARRLLTP PPEGQQGRGQ RNTKAKEVVV DVGDEDNEPL ESRRQRNAMQ  540
CATVTGVRIC AAQEERPPQG AMSSTPSQPR PRNTAVDEGF TECGGGEVAQ QEARVASAGA  600
GAGSSGNVGV VAGARKEVPV VEREVARGEN KGERGDDDPL LSRERRGGLA RDLADRARLW  660
VDDKAFWTTG EGRRLYDIVH RTREHFEAIA SRVQAPVVSR SVVMPKSATS LTRIADPAQL  720
QQAIIRGGAA ENIVLLVLHG PCARYVVWRG VEQRGECAHT IDLNMDLPLW FAGVNIDDRP  780
EDDDMVAYQE STVLCVANAF RTAVQMGANV DDGFISHDRL SRIADCFRLL LAACMWLMRM  840
AGDDHRSHYE AFYFAQLVAK PTLIASMHRA FDYRRSVIRA TNVVTERLGK VNATFGEYPK  900
FIPDWASCGI KFGHDASIMG PEDAKKRDWL GSGPLEEDGD DNGENDA