PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63731.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 856aa MW: 93139.1 Da PI: 6.9575

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.6	1.5e-08	274	348	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e +L++ +re e +l r k+ +We+++k+m g + C +kw+n+ + ykki++ ++ GBG63731.1 274 WSPEEQIQLVRCKREQEMHLAglghnygRMWIKEWKWEDIAKRMXNAGRPKDXDBCMKKWDNIFQNYKKIQRFQN 348 99999999999999777777633222224559*************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
MYNHLPLWET PLPPSDEEPE GDELPTFPLG SGSTHLLSQT VLAGGSVSNG RGEYTTLLQQ 60 GLGDDDDGGV DLRFGLSSGG GREASHTFIM DVDPSPRGVQ QSGSRHTKQS TLRGGVSVCG 120 GVRPSSAGRQ HGSSAQSADR LTSTCPERNG VALGSLRIGG TLHSMPKSTT PTQPDLRDDD 180 TCRPVVRPTP SVENITQGVS NMQAHSDGGD DDADGRFGED VEARDDDDDI PIRPLGKTSG 240 RGRGRSRGAL RGRSVGCGGK GGVSDDGGKS ATYWSPEEQI QLVRCKREQE MHLAGLGHNY 300 GRMWIKEWKW EDIAKRMXNA GRPKDXDBCM KKWDNIFQNY KKIQRFQNAS GRPDFFRLSN 360 EERKEHNFKF RMERALYNEI HIGMVGNHTI LPPNITDTGS PDGVHLPRRG AGAGESVGSE 420 GAGEGLPEER STTRDSDNNA ASGAGGGKRK NARQQALQSI ADVMDRHGEL MSSTIESSSK 480 RQCSIFTRQY DILEQEVAVQ KAHYAASDET QRMMCHMPME IAAAIRGRSA MSPRNMSTRG 540 NTRGKKRDVV VDDNQGQGRG RRQAPKAKRV RTEDALRRVC GRGAQGWAEE AEGDCDDEFT 600 TEEEQAEAIT SEVRESDRQH SSDRTASTRM QTPPHEAQQL RGRETRTEKA PIVDLGGDDD 660 EPLERRRIRI RTTTTPPPEV VMRVATNERP VLGRLPATPS QPRQRNDAGD GGSIQRGGGG 720 EVVAHARAVG AQVAGAVGAG GSGNVTAVAT GREEAAVVAT AREEARGERK VEREAGEAGL 780 SRPRRSIMTK DLIDRAVLWV DDKAFWTTGE GRRLYNIVHE MKDYFVAIAN GLPVPDVPWS 840 VVLPKASTRV ARIVDQ

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

MYNHLPLWET PLPPSDEEPE GDELPTFPLG SGSTHLLSQT VLAGGSVSNG RGEYTTLLQQ  60
GLGDDDDGGV DLRFGLSSGG GREASHTFIM DVDPSPRGVQ QSGSRHTKQS TLRGGVSVCG  120
GVRPSSAGRQ HGSSAQSADR LTSTCPERNG VALGSLRIGG TLHSMPKSTT PTQPDLRDDD  180
TCRPVVRPTP SVENITQGVS NMQAHSDGGD DDADGRFGED VEARDDDDDI PIRPLGKTSG  240
RGRGRSRGAL RGRSVGCGGK GGVSDDGGKS ATYWSPEEQI QLVRCKREQE MHLAGLGHNY  300
GRMWIKEWKW EDIAKRMXNA GRPKDXDBCM KKWDNIFQNY KKIQRFQNAS GRPDFFRLSN  360
EERKEHNFKF RMERALYNEI HIGMVGNHTI LPPNITDTGS PDGVHLPRRG AGAGESVGSE  420
GAGEGLPEER STTRDSDNNA ASGAGGGKRK NARQQALQSI ADVMDRHGEL MSSTIESSSK  480
RQCSIFTRQY DILEQEVAVQ KAHYAASDET QRMMCHMPME IAAAIRGRSA MSPRNMSTRG  540
NTRGKKRDVV VDDNQGQGRG RRQAPKAKRV RTEDALRRVC GRGAQGWAEE AEGDCDDEFT  600
TEEEQAEAIT SEVRESDRQH SSDRTASTRM QTPPHEAQQL RGRETRTEKA PIVDLGGDDD  660
EPLERRRIRI RTTTTPPPEV VMRVATNERP VLGRLPATPS QPRQRNDAGD GGSIQRGGGG  720
EVVAHARAVG AQVAGAVGAG GSGNVTAVAT GREEAAVVAT AREEARGERK VEREAGEAGL  780
SRPRRSIMTK DLIDRAVLWV DDKAFWTTGE GRRLYNIVHE MKDYFVAIAN GLPVPDVPWS  840
VVLPKASTRV ARIVDQ