PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63581.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 601aa MW: 65180.5 Da PI: 6.2667

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.6e-09	502	579	5	79
trihelix 5 qevlaLiearr..emeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstc 79 + laLiea+r ++ + r+ +We v++++ + r +++ Ck+kw++l +y++i +++ + s++ + + GBG63581.1 502 AHKLALIEAKRleAIDPEARKLDGGPLKWEVVARAVmriSGRATDKTAASCKKKWNELTSKYRQILDSNLR--SGKPKYW 579 556889999985555666666667789*******555567889******************999987..4555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MESCDARNGC PGYPHRFESS PTWHEFRERA LAKTNGDQQK QVGAQSLSEG EEETRRGEEE 60 EDEGTVPLAG KKDRESVEME GGDGEESGMM RSAAAGGRHP GAVSQIHEEA NGCPIAKNSS 120 AGMNEEEEAA GGVRGGRDEE EETVQGKEYR EEDGTERVGT HGGGRPAENA SCWSELVRPE 180 RGVHAWGTKR SGRTGRAEVS VERWKKTKMQ SREQRMRRRR VAVASEKGTR GRNGHGLSGG 240 SGERPEALAA NYRALSQTRE EATWGTRLGD EAQRANRDNR EYKVGKNIGG ERNEAEDGQQ 300 TNREGGGHEG KKQSADDQRA ESLHRCRLWG KSYEELLQSD GGPDGAGQLS SGMHGVHGMQ 360 PSWGYSDGTT SGDDDLFTPP ASELPTQQLS TPSVCNITSA CNTMMGGHTP LTPRSLLGEG 420 THVGVDAVFT SVAQYMTPNM PAGFQNAQSR GPLPSPGGSG DDDEASEPSN GGGKKGRGSG 480 WDRSLLIALI EAKRLEAIDP EAHKLALIEA KRLEAIDPEA RKLDGGPLKW EVVARAVMRI 540 SGRATDKTAA SCKKKWNELT SKYRQILDSN LRSGKPKYWE MTPAERKNAK HAEGRTKDIL 600 L

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MESCDARNGC PGYPHRFESS PTWHEFRERA LAKTNGDQQK QVGAQSLSEG EEETRRGEEE  60
EDEGTVPLAG KKDRESVEME GGDGEESGMM RSAAAGGRHP GAVSQIHEEA NGCPIAKNSS  120
AGMNEEEEAA GGVRGGRDEE EETVQGKEYR EEDGTERVGT HGGGRPAENA SCWSELVRPE  180
RGVHAWGTKR SGRTGRAEVS VERWKKTKMQ SREQRMRRRR VAVASEKGTR GRNGHGLSGG  240
SGERPEALAA NYRALSQTRE EATWGTRLGD EAQRANRDNR EYKVGKNIGG ERNEAEDGQQ  300
TNREGGGHEG KKQSADDQRA ESLHRCRLWG KSYEELLQSD GGPDGAGQLS SGMHGVHGMQ  360
PSWGYSDGTT SGDDDLFTPP ASELPTQQLS TPSVCNITSA CNTMMGGHTP LTPRSLLGEG  420
THVGVDAVFT SVAQYMTPNM PAGFQNAQSR GPLPSPGGSG DDDEASEPSN GGGKKGRGSG  480
WDRSLLIALI EAKRLEAIDP EAHKLALIEA KRLEAIDPEA RKLDGGPLKW EVVARAVMRI  540
SGRATDKTAA SCKKKWNELT SKYRQILDSN LRSGKPKYWE MTPAERKNAK HAEGRTKDIL  600
L