PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62809.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 335aa    MW: 36614.2 Da    PI: 7.4049
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.61.8e-0913572670
    trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                 + ++We+v+ ++ + g++r+++ Ck+kw +l k+ ++i++  ++
  GBG62809.1 13 TRSKRWEWVAGRLGDIGYSRTAEDCKKKWAELVKKVREIRDACEG 57
                5689*******************************9999987554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MMADAEGAQA CMTRSKRWEW VAGRLGDIGY SRTAEDCKKK WAELVKKVRE IRDACEGSGK  60
QAYWDTTTEQ RRRLGVSLTF ERQMWDAMEW YRLKKSVTCD DTLASEDLRG GGSPSGGEAG  120
SEGGGTDASD TATKTRRTSS GKARGGDSPT SMYGMASVME ESTRALCEGL DKTASTLARA  180
STDGSRMVAT EIGVVVGAMR QGNAVLEMLV GVMAARGAGS GRGANGNAFG REIDRKSYRY  240
YSVDVNGKAA ADLDVAIGYH KRQLSHVLVW VKKLGSFIPD DWESLTVDIL GDIILKLVDN  300
LAEDHDWRLD KGVFSYTYLD PRLVGRGYLH GEIRM