PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG62507.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bZIP

Protein Properties

Length: 430aa MW: 45986.8 Da PI: 8.7303

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG62507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	62.2	9.9e-20	223	284	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+e kr+rrkq+NRe+ArrsR+RK+ae+e L ++v +L+ eN++L++e+++ ++++ +l e GBG62507.1 223 EREAKRQRRKQSNRESARRSRLRKQAECEDLGTRVSTLTMENMRLRSEISKARENYNQLAEE 284 799*****************************************************999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MGESGREDPT TGLEARRDAL GGFSDWAAAM QVYYKTGPHP PLHGYYPGHV APPPYVWGPQ 60 PVMPPYGAPP HPYFHGGVYH HPAMPGHAPP PPPPPPPAYG YGVPAAMVDL AVVRPKSAES 120 GEGGATTAVL MHPVGVAVAP ANTVTRPAIG LENGSDGSSG SDAVDVMERK RKFEVMMPDP 180 MISRMDHVAI APAKDGLPCS AVTTTSSEST RLAAGLASST LDEREAKRQR RKQSNRESAR 240 RSRLRKQAEC EDLGTRVSTL TMENMRLRSE ISKARENYNQ LAEEQALLQQ QIHAATNSAA 300 DVSFGVSTSS RGKPSPCREV DGKSRRGMQL VHIKDNAADN SAPVTLVLDD DATEGGALVR 360 RDREGLVTRT LWGKSDVVKK TLSLVAGMER DSGAKSVKIE PATNVLGSSS SPWNRQQRSK 420 LEESVVATVA

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MGESGREDPT TGLEARRDAL GGFSDWAAAM QVYYKTGPHP PLHGYYPGHV APPPYVWGPQ  60
PVMPPYGAPP HPYFHGGVYH HPAMPGHAPP PPPPPPPAYG YGVPAAMVDL AVVRPKSAES  120
GEGGATTAVL MHPVGVAVAP ANTVTRPAIG LENGSDGSSG SDAVDVMERK RKFEVMMPDP  180
MISRMDHVAI APAKDGLPCS AVTTTSSEST RLAAGLASST LDEREAKRQR RKQSNRESAR  240
RSRLRKQAEC EDLGTRVSTL TMENMRLRSE ISKARENYNQ LAEEQALLQQ QIHAATNSAA  300
DVSFGVSTSS RGKPSPCREV DGKSRRGMQL VHIKDNAADN SAPVTLVLDD DATEGGALVR  360
RDREGLVTRT LWGKSDVVKK TLSLVAGMER DSGAKSVKIE PATNVLGSSS SPWNRQQRSK  420
LEESVVATVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	246	RRSRLRK
2	240	247	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	2e-18	bZIP family protein