PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62379.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family NF-YC
Protein Properties Length: 238aa    MW: 26040.4 Da    PI: 5.2655
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC60.73e-191222021999
       NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                  +lPl+r+k+++k++  v+ ++aea +l++ka elf+  +  r++ +  e +r +l+ +d+a av+  +  dfl di+p++
  GBG62379.1 122 SSLPLSRVKRLIKSEGGVQLVTAEANILITKATELFLESFVERAYERMLEDTRYSLQYNDVAHAVAGDHRLDFLSDIIPQK 202
                 68****************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MISFLICCCG RPCLGRRGAH WSSFLIFKQE REQRRRQGGG GDKEEEEEQE KKAWKGGAGG  60
EEERQIDVVR STEEGDMEKE ASSCAGKGMA EEDTDTAGCV GLSRAYAIGG TSLHSQSMSA  120
VSSLPLSRVK RLIKSEGGVQ LVTAEANILI TKATELFLES FVERAYERML EDTRYSLQYN  180
DVAHAVAGDH RLDFLSDIIP QKVLVSKLLP SLQPPPPAGI SEAKEMEKGN GVKAKAEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50480.12e-16NF-YC family protein