PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61349.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 485aa MW: 53107.8 Da PI: 8.7166

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.7	5.3e-12	192	268	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 rW ++e+ L ++r+e++ +++++ lk++ W+ v +m+e+g++r +qCk+k++++ +y+++k +e+ GBG61349.1 192 RWGEDETAWLCRFRNEVKLQMNEDTeaygrawLKANFWKNVELRMKEKGYNRDHEQCKNKFNQVIEYYRRLKCHERW 268 8************99999998766677777**************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MVEGQPSTAH CAQRLSFHSD GAPSDDCRAA SSGLSPITSV NHVSSASRTQ RGGAATTRPL 60 SDVGIGGRGS SSSPVPHGSP HTPSMASRHH VPSEYLINRL IRDIKDGVSP SPVAADTAAA 120 FAVGGNAAAP ARTPPRQSVD PTPVNRTPTR GGGRGECSQS PSGAVREVGT SPAAGPQGQQ 180 GRALALEKNK DRWGEDETAW LCRFRNEVKL QMNEDTEAYG RAWLKANFWK NVELRMKEKG 240 YNRDHEQCKN KFNQVIEYYR RLKCHERWSR LPSYWDMNST EKKKYNVDFV LRRSWYDIID 300 SVEKDTDSIN LTYLRDSGDD PRRHTETDDM ADADGQTEGV SDDLGRGSGA ASGGTRSTTF 360 ESTLGKRKRA VSNAREASVQ AVTSAMRDHT TSLTRSDREC AKMRCETTPD VKKQQAELAT 420 QLMQQELAGR ERVASIVGGR VESGMNRLAD AIVMNGMNRL ADAIVMMASR RRSHSPNDPT 480 RDDSE

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MVEGQPSTAH CAQRLSFHSD GAPSDDCRAA SSGLSPITSV NHVSSASRTQ RGGAATTRPL  60
SDVGIGGRGS SSSPVPHGSP HTPSMASRHH VPSEYLINRL IRDIKDGVSP SPVAADTAAA  120
FAVGGNAAAP ARTPPRQSVD PTPVNRTPTR GGGRGECSQS PSGAVREVGT SPAAGPQGQQ  180
GRALALEKNK DRWGEDETAW LCRFRNEVKL QMNEDTEAYG RAWLKANFWK NVELRMKEKG  240
YNRDHEQCKN KFNQVIEYYR RLKCHERWSR LPSYWDMNST EKKKYNVDFV LRRSWYDIID  300
SVEKDTDSIN LTYLRDSGDD PRRHTETDDM ADADGQTEGV SDDLGRGSGA ASGGTRSTTF  360
ESTLGKRKRA VSNAREASVQ AVTSAMRDHT TSLTRSDREC AKMRCETTPD VKKQQAELAT  420
QLMQQELAGR ERVASIVGGR VESGMNRLAD AIVMNGMNRL ADAIVMMASR RRSHSPNDPT  480
RDDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	8e-08	Trihelix family protein