PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG61271.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 497aa    MW: 54588.4 Da    PI: 7.7625
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG61271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.42.8e-11334411271
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 
                 W  +e l+L++ +r+++e + ++       k k  +W e++k+m ++g+ +r  + C ++wen+ + y+ki ++ek+ 
  GBG61271.1 334 WHLDESLVLVRCKRDLDEYMASQgsnfarmKTKTWKWNEIAKRMVQQGVtNRDGESCMKRWENIFGWYRKIWDREKDS 411
                 99************887777753222333379999*********9999879**********************99973 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MADLLRKTAL LSILLVALLI VIVVQLCQLL RHCRARPRKK QTKKDCGGRR ARKGMGDDNP  60
HGGHMYGMGS APTNGVPEGM RQRFDPTLYA HLPSYMQPLP DDEDWVPPPS TJPLAWGSTQ  120
TSYETGGRSG DRGTGMGXMS TLLTGGGGAG PDPLQLHLSP XCSMDASRTV LVEHXXRSQX  180
GVSVTMQDAR EDGPQTQRXA RSSSACTXSH SRPXGFTTPL GTGVPHAVVN XRVTTXTAXE  240
SPQVIERIIA RYSRMRTDVQ RDDVGDTCAD GEDVPEDCTD DDBESDDDXE PAVKEPTXKG  300
GKKKASKSRA KSKXREEXGG AXGEGGGGST RXNWHLDESL VLVRCKRDLD EYMASQGSNF  360
ARMKTKTWKW NEIAKRMVQQ GVTNRDGESC MKRWENIFGW YRKIWDREKD SGVQSFFLLS  420
SKKRKELGFK FAMDRQLYDA IHATTPNNQA IHPPNLRDTG GLPPQQPNEG EQSQPRGPTV  480
VGETSASDNM ESGAGDG