PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61107.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

ERF

Protein Properties

Length: 790aa MW: 83212.9 Da PI: 7.067

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.1	2.1e-13	678	724	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 sg++GV+w k +++W+A+I+ + k + lg f + eeAa+a+++a + GBG61107.1 678 SGFRGVCWSKGTKKWRAQIKF------NqKGVTLGDFHSQEEAAAAYDKALIQ 724 79*****************......44******************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MLQIPRQADM GVGGGMLTCP TSTGLMGHHN QRGGGTMYSH CTGSSGSSAD SIIGRTTVDR 60 LMSESLRMAG GCSSLDHNHS QHHHAQTGGA GSNPHDPNNM AAAIVLNLEL LHAFHHPASH 120 AALDSSSCDL VQSPRRCGSP LNASPRAVIN APSLSGDLSS AVAETKALCS SVGSASGGLS 180 GTLPPESSGH GAALDSSQTA ASLFYQHEEE ASHQHQHQHQ HQQHQQHQHQ QQHQQQHQQQ 240 QQQQQQQQQQ HHHHHHHHHH LQLFPAACAS PDLAQTAIPR SASSASGVGG GMGGHSPSSG 300 TGGTAGSALS HHSPSHWPSS DRSMQVQDYV WAGQGESVLL SNAEMGIDHN FNLLNVNTET 360 QLRMAAEAVA AAAVAGDDLS GLKAAAGAVV GAQGSDPLDS SGASLLDQNA AAAAAAAAAA 420 AAQQDSAAAA IHWQLLSAVS NAGGVSSQQT SHHSHSHSHS HSLQDHQLDK NVDLELQIKP 480 HQALKLGHIA LPNGGSAMAE SMSGDGLMSD ARTTGGSYSL GGADMNLRDL ERAADVHDLE 540 RAINMPQSLR LGGLADGLLG AANSQLGARG IDDGGGLNPN LVREPKRRSK FIGIAWQRRG 600 WQARVKKGTR LNLGVWSSEE QAARVRDRAA YKLLGHKAVL NFELSPEERA ELDAMSDESF 660 FASLRLAKTR RKYAIGKSGF RGVCWSKGTK KWRAQIKFNQ KGVTLGDFHS QEEAAAAYDK 720 ALIQRDGPKA LTNAAISFGI PNELVMMLDF EKATLLYCSK SAFQAARRED LAAAGAEEMG 780 AATGDGRGWD

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MLQIPRQADM GVGGGMLTCP TSTGLMGHHN QRGGGTMYSH CTGSSGSSAD SIIGRTTVDR  60
LMSESLRMAG GCSSLDHNHS QHHHAQTGGA GSNPHDPNNM AAAIVLNLEL LHAFHHPASH  120
AALDSSSCDL VQSPRRCGSP LNASPRAVIN APSLSGDLSS AVAETKALCS SVGSASGGLS  180
GTLPPESSGH GAALDSSQTA ASLFYQHEEE ASHQHQHQHQ HQQHQQHQHQ QQHQQQHQQQ  240
QQQQQQQQQQ HHHHHHHHHH LQLFPAACAS PDLAQTAIPR SASSASGVGG GMGGHSPSSG  300
TGGTAGSALS HHSPSHWPSS DRSMQVQDYV WAGQGESVLL SNAEMGIDHN FNLLNVNTET  360
QLRMAAEAVA AAAVAGDDLS GLKAAAGAVV GAQGSDPLDS SGASLLDQNA AAAAAAAAAA  420
AAQQDSAAAA IHWQLLSAVS NAGGVSSQQT SHHSHSHSHS HSLQDHQLDK NVDLELQIKP  480
HQALKLGHIA LPNGGSAMAE SMSGDGLMSD ARTTGGSYSL GGADMNLRDL ERAADVHDLE  540
RAINMPQSLR LGGLADGLLG AANSQLGARG IDDGGGLNPN LVREPKRRSK FIGIAWQRRG  600
WQARVKKGTR LNLGVWSSEE QAARVRDRAA YKLLGHKAVL NFELSPEERA ELDAMSDESF  660
FASLRLAKTR RKYAIGKSGF RGVCWSKGTK KWRAQIKFNQ KGVTLGDFHS QEEAAAAYDK  720
ALIQRDGPKA LTNAAISFGI PNELVMMLDF EKATLLYCSK SAFQAARRED LAAAGAEEMG  780
AATGDGRGWD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	8e-16	AP2 family protein