PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61031.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 676aa MW: 73497.6 Da PI: 6.5129

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41.7	2.9e-13	390	465	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + + L ++r+e+++ l++ lk + W++v ++m+ +gf+r++ qCk+k++ l +y+++k++e+ GBG61031.1 390 RWGETXTEWLCRFRNEVKSLLGEXTeplgrarLKLGXWKDVEQRMKGKGFNRNADQCKNKFNTLLDYYRRLKAHEG 465 79999999999999988888886422333333*****************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MNGVALSLSP YPARHAKVSS CARSDMLSRE SPFLSVSLVC SSSSCTVDSV NAEDDEQPSM 60 DHYSHPAGLS SIDDWGYSET QNEAPPAARF SSSSQVAGQE QQSLSLSGSQ SQCPIGDTVG 120 GAEGDVQRPH TSSAFLFEGP AWSGGPVRGP DNAHGCAVVT DVPVQSVVTS HXHFSSPVSP 180 VGGFRIGLSG EDEVALRQQL RMRAMAMSDG LCMXXBERGM SGVMTSPARH DGRGHGSPGP 240 STVSSVDNET VGCRSSTPPA AMSATRXASF PLSPEXIPRD VSPQPXRARS XXAEYVINRI 300 IRDNETVVPP VEWPTRTAVE GDAVADPTAA GRSPPPRVXF EGLNTPSPVA APSTSQHTPC 360 SVENSAGTST XRPCEGPPTR PPSREKNTDR WGETXTEWLC RFRNEVKSLL GEXTEPLGRA 420 RLKLGXWKDV EQRMKGKGFN RNADQCKNKF NTLLDYYRRL KAHEGWSGLP SYWDMNASRR 480 KKYNVDFVLR RAVYDITHPV EKDKDSINLT NLMDSGADEE RLEDSERCND VDGETEGGSE 540 DPAAGSGSSP GLRTSRRGPH STSFDPVLGK RRRTATNARE SSMQAITGAM RDHTSALTRS 600 DRECVKMRCE ATRDIARHQA ELHRELMQQD IASRERIATI TGDWVEKGYL VLADAIRSLR 660 PRRNSPSSGL DSSDSR

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MNGVALSLSP YPARHAKVSS CARSDMLSRE SPFLSVSLVC SSSSCTVDSV NAEDDEQPSM  60
DHYSHPAGLS SIDDWGYSET QNEAPPAARF SSSSQVAGQE QQSLSLSGSQ SQCPIGDTVG  120
GAEGDVQRPH TSSAFLFEGP AWSGGPVRGP DNAHGCAVVT DVPVQSVVTS HXHFSSPVSP  180
VGGFRIGLSG EDEVALRQQL RMRAMAMSDG LCMXXBERGM SGVMTSPARH DGRGHGSPGP  240
STVSSVDNET VGCRSSTPPA AMSATRXASF PLSPEXIPRD VSPQPXRARS XXAEYVINRI  300
IRDNETVVPP VEWPTRTAVE GDAVADPTAA GRSPPPRVXF EGLNTPSPVA APSTSQHTPC  360
SVENSAGTST XRPCEGPPTR PPSREKNTDR WGETXTEWLC RFRNEVKSLL GEXTEPLGRA  420
RLKLGXWKDV EQRMKGKGFN RNADQCKNKF NTLLDYYRRL KAHEGWSGLP SYWDMNASRR  480
KKYNVDFVLR RAVYDITHPV EKDKDSINLT NLMDSGADEE RLEDSERCND VDGETEGGSE  540
DPAAGSGSSP GLRTSRRGPH STSFDPVLGK RRRTATNARE SSMQAITGAM RDHTSALTRS  600
DRECVKMRCE ATRDIARHQA ELHRELMQQD IASRERIATI TGDWVEKGYL VLADAIRSLR  660
PRRNSPSSGL DSSDSR