PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG60823.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB

Protein Properties

Length: 2915aa MW: 318162 Da PI: 6.3935

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG60823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.2e-18	1013	1059	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WTteEd+ l ++v+ +G+++W++Ia++++ gR +kqc++rw+++l GBG60823.1 1013 KGQWTTEEDDTLRQLVQVHGPKNWSLIAARLP-GRVGKQCRERWHNHL 1059 799***************************.***********97 PP
2	Myb_DNA-binding	59.7	6.5e-19	1065	1108	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + +WT+eE+++lv a+++lG++ W+ Ia+ ++ gRt++++k++w++ GBG60823.1 1065 KEAWTQEEELKLVAAHNKLGNK-WAEIAKLLP-GRTDNSIKNHWNS 1108 579*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 2915 aa Download sequence
MQYVPSVPAG AIVNVHLTVM VNAPQSSWPA TGMPSVVHAS ETLWRAICVM GVTNSRGGNG 60 HCITKLALMS MEQDTGALPR RSARLAGRAR SVIPLRRRTL RLSSRTTPAA SSTALTVPVT 120 TGVLPACPVQ RAGEPLVDYL QWVQAFTDDV ATAKAQEEAE AERQRLAKEA APQAQQTAED 180 DAAARDQRNA AIMESLIHNE NQWTTILEGM XFVPSEEQAD PTPAEAERTH LANVMLTMMR 240 AIMWNNTMLA TRPDAATKSY KMPHFDISKF DDHNKTDALA WWQRFLTEAS CRTVQDDYMM 300 KALYLQLIGG TQAWMNHLAA THTCTIAELH THITWKEFEQ LWFTRFKVRN VVKAAMKEVY 360 TCSQGSMPTR DWTTKWHKIV TMPGFDLTFP NQRSELFSRS CAGLRSALGN EYDYTSFQAI 420 LDRANLVIQT DDKAANEKQS QPHYVANQGY QRPTHNNAVI YEGTKDLHAA AASSSDGGIV 480 AALPPKLYFA PLACEPVSFD VLDTKFNMIL VMSWLRSADH PVNFHDWTVH IRDRNGVLVP 540 CTVATPRTSI ACHVVSVARI RDAIARNDVE EMGLVFLHAL PSPDGPAASP PDPHISHLLD 600 EYTDVFEAPT GTVPDRPIRH GITLEAGAVP RRGCIYHMSE EELEVLRAQL DDLLDKGWIR 660 PSCSPYGTPI LFVWKKNKDL RLCIDYRKLN AQTVKNAGPL PRIDDLLERL GGATYFSKLD 720 LKSGYHQIEI QPQDRYKTAF KTRYGHFEWV VMPFGLTNAP ATFQAAMTTE FRDLLDRSVL 780 IYLDDILVYG RTLDEHITHL RAVLNCLRLA KYKANRDKCE FAKQELEYLG HYVTPKGIRP 840 LADKIQAIVD WSEPRCLMHR GQFAQDVRDP GNEGVLFENM SILDEIESTN DVMMKGVDDD 900 GGDFCLSEVL GAADCPSATE LVGPASWKGT SEEVGTVDGQ QAGSMDVDDA CLEDGVGETG 960 EDRHTHPSGG EAGGGSSEDD GLGKWDDDGS SEKKAGAQRR TEVGVITSAG VVKGQWTTEE 1020 DDTLRQLVQV HGPKNWSLIA ARLPGRVGKQ CRERWHNHLK PNIRKEAWTQ EEELKLVAAH 1080 NKLGNKWAEI AKLLPGRTDN SIKNHWNSTT RRKGIVCILL DCSTPVPTLR TPLYSVNTGT 1140 SQVPHQFRLM SMEQDTGALP RRSARIAVRA RPAVPPRPKR FSRRMTPAAS STTLTVQDTT 1200 GDLPACPVRE ASEPLADYRG RLQAFTDAVA AAEAQQAAAE AERQRLANEA AAEAQRTAET 1260 NEAARNRRNA ASTESLIASE YQWTTILQGM IFVPTETQAE RTQAEAKGSN LATVMLNAKA 1320 SAPPGCTTDA TKQINERIDH VVTIIGDIGV FNGPDTISST VAAIKTDITK LQTRPDAATK 1380 TFKMPHFDIC KFDDYNKSDA LTWWQRFLTE ASCRTVPAND MLKALYLQLI GGAQAWMNHL 1440 AATHKCTIAE LHMHITWKEF EQLWFTRFMV RNVVKAAMNE VYTCSQGNMP TRDWTTKWQK 1500 IVTTPGFDLT FPNQRSEFFS RSCAGLRSTL GNEYDYTTFQ AILDRANLVI QTDDKAANER 1560 QSQPHYVAKQ AYQRPTHNNA VISEETDDLH AAAASSSDRG NCSSAPAEAS QESSEEQGDT 1620 RDSIDGNWAA AMDXLQDNQG FYFAPLACEQ VSFDILDTKF DMILGMSWLR SADHPVNFHD 1680 RTVHIRDRNG VLVPCTIATP HTSIACYVVS VARIRDAIAR NDVEEMGLVF LHALPSPDGP 1740 AASPPDPRIS HLLDEYRDVF EAPTGTVSDR PIRHGITLEA GAAPPCGCIY CMSEEELEVL 1800 RAQLDDLLDK GWIRPSCSPY GAPVLFVRKK NKDLRLCIDY RKLNAQTVKN AGPLPRIDDL 1860 LEQLGGATYF SKLDLKSGYH LIEIQPQDRY KTAFKTRYGH FEWVVMPFGL TNAPATFQAA 1920 MTTEFRDLLD RTVLIYLDDI LVYTKYKANL DKCEFAKQEL EYLGHFVTPK GISPLADKIQ 1980 AIVDWPEPRC STDVRSFMGL AGYYQRFVES YSKVAAPLSR LQSPKDEGMR GSGRGARSRP 2040 DILQKYIMQL KAQNRERHQQ AELRRLSQAQ LAQHQDLHSS NPSDLQLREK TDAMLANLRK 2100 QQGPWGPSFV DGSLPSRSTM MFGGMAGQMS LFQDLMMASV QRNCEKGNFM QPNGRGVPGA 2160 TKEALHQQHQ LEPVVSSAMN SQLPTLGMEQ RPCGTSFSDI GRHSGIGHAV GGLGGVTRPS 2220 AEQAAVSAPT SVDFATSLCL GAGGPALGRE VNVSGMATAG LANAGAMTDV SGVSVMDLQQ 2280 QEQQKQQQQE NLNEQQLRSL QQHMSVCGQG SALAVQTDTS LPMLGGSTLA SILLSKGVSS 2340 IRPMKCAEET SADPGMLAGQ PSMTNGVSND RLWDLDSVRG EGYPCGTRPL PQGKLGVEPL 2400 GSNGLISGSA SDLNRQVNQD LVSKARPQQV IDSMGSASER QGCQQLSKQS AGGSLALPLQ 2460 QFPMPVCGSL RKRPRQIGPN GYGSSGCTLP GGDVSSAMRI DTDDAAALFG SSSTLGTSRA 2520 TVSSISSGGT TSAGSGICSL TQSGGRAARP FEAQATPVQM PGLGLPCTRV PESDQCLSPT 2580 VPGEPVNAIS KSDGNCPAAV SPPSGCPPSS NVCRNRSIIK RCKQETRSIP AHGSLEGLLQ 2640 ALGRNSPPPL ESEDEDSDYG IANGGQSEQE RNIIMESSTG AANPSTLAPL VPSKEEMTNL 2700 ESEVAAEDIL MKLLLASSSG RGLNESGAQK EMGRWNTGLP NMPIPVPMPL PAGSTGKPAD 2760 VDTTIHRPMN LIVPENPLLT CVRAGIGMRM PTSLGSRSTA APSANASSLA PLLSSPRDSG 2820 NTGTGTGYWD PCQLHLVQTF MSPPPMFSSG LVLGGSMGGN LPNNTVSNAI GSSGFDTFSS 2880 LLRMMAEDTL PSLYDPSANP PPSNTDPVAC GWRAN

Sequence ? help Back to Top

Protein Sequence Length: 2915 aa Download sequence

MQYVPSVPAG AIVNVHLTVM VNAPQSSWPA TGMPSVVHAS ETLWRAICVM GVTNSRGGNG  60
HCITKLALMS MEQDTGALPR RSARLAGRAR SVIPLRRRTL RLSSRTTPAA SSTALTVPVT  120
TGVLPACPVQ RAGEPLVDYL QWVQAFTDDV ATAKAQEEAE AERQRLAKEA APQAQQTAED  180
DAAARDQRNA AIMESLIHNE NQWTTILEGM XFVPSEEQAD PTPAEAERTH LANVMLTMMR  240
AIMWNNTMLA TRPDAATKSY KMPHFDISKF DDHNKTDALA WWQRFLTEAS CRTVQDDYMM  300
KALYLQLIGG TQAWMNHLAA THTCTIAELH THITWKEFEQ LWFTRFKVRN VVKAAMKEVY  360
TCSQGSMPTR DWTTKWHKIV TMPGFDLTFP NQRSELFSRS CAGLRSALGN EYDYTSFQAI  420
LDRANLVIQT DDKAANEKQS QPHYVANQGY QRPTHNNAVI YEGTKDLHAA AASSSDGGIV  480
AALPPKLYFA PLACEPVSFD VLDTKFNMIL VMSWLRSADH PVNFHDWTVH IRDRNGVLVP  540
CTVATPRTSI ACHVVSVARI RDAIARNDVE EMGLVFLHAL PSPDGPAASP PDPHISHLLD  600
EYTDVFEAPT GTVPDRPIRH GITLEAGAVP RRGCIYHMSE EELEVLRAQL DDLLDKGWIR  660
PSCSPYGTPI LFVWKKNKDL RLCIDYRKLN AQTVKNAGPL PRIDDLLERL GGATYFSKLD  720
LKSGYHQIEI QPQDRYKTAF KTRYGHFEWV VMPFGLTNAP ATFQAAMTTE FRDLLDRSVL  780
IYLDDILVYG RTLDEHITHL RAVLNCLRLA KYKANRDKCE FAKQELEYLG HYVTPKGIRP  840
LADKIQAIVD WSEPRCLMHR GQFAQDVRDP GNEGVLFENM SILDEIESTN DVMMKGVDDD  900
GGDFCLSEVL GAADCPSATE LVGPASWKGT SEEVGTVDGQ QAGSMDVDDA CLEDGVGETG  960
EDRHTHPSGG EAGGGSSEDD GLGKWDDDGS SEKKAGAQRR TEVGVITSAG VVKGQWTTEE  1020
DDTLRQLVQV HGPKNWSLIA ARLPGRVGKQ CRERWHNHLK PNIRKEAWTQ EEELKLVAAH  1080
NKLGNKWAEI AKLLPGRTDN SIKNHWNSTT RRKGIVCILL DCSTPVPTLR TPLYSVNTGT  1140
SQVPHQFRLM SMEQDTGALP RRSARIAVRA RPAVPPRPKR FSRRMTPAAS STTLTVQDTT  1200
GDLPACPVRE ASEPLADYRG RLQAFTDAVA AAEAQQAAAE AERQRLANEA AAEAQRTAET  1260
NEAARNRRNA ASTESLIASE YQWTTILQGM IFVPTETQAE RTQAEAKGSN LATVMLNAKA  1320
SAPPGCTTDA TKQINERIDH VVTIIGDIGV FNGPDTISST VAAIKTDITK LQTRPDAATK  1380
TFKMPHFDIC KFDDYNKSDA LTWWQRFLTE ASCRTVPAND MLKALYLQLI GGAQAWMNHL  1440
AATHKCTIAE LHMHITWKEF EQLWFTRFMV RNVVKAAMNE VYTCSQGNMP TRDWTTKWQK  1500
IVTTPGFDLT FPNQRSEFFS RSCAGLRSTL GNEYDYTTFQ AILDRANLVI QTDDKAANER  1560
QSQPHYVAKQ AYQRPTHNNA VISEETDDLH AAAASSSDRG NCSSAPAEAS QESSEEQGDT  1620
RDSIDGNWAA AMDXLQDNQG FYFAPLACEQ VSFDILDTKF DMILGMSWLR SADHPVNFHD  1680
RTVHIRDRNG VLVPCTIATP HTSIACYVVS VARIRDAIAR NDVEEMGLVF LHALPSPDGP  1740
AASPPDPRIS HLLDEYRDVF EAPTGTVSDR PIRHGITLEA GAAPPCGCIY CMSEEELEVL  1800
RAQLDDLLDK GWIRPSCSPY GAPVLFVRKK NKDLRLCIDY RKLNAQTVKN AGPLPRIDDL  1860
LEQLGGATYF SKLDLKSGYH LIEIQPQDRY KTAFKTRYGH FEWVVMPFGL TNAPATFQAA  1920
MTTEFRDLLD RTVLIYLDDI LVYTKYKANL DKCEFAKQEL EYLGHFVTPK GISPLADKIQ  1980
AIVDWPEPRC STDVRSFMGL AGYYQRFVES YSKVAAPLSR LQSPKDEGMR GSGRGARSRP  2040
DILQKYIMQL KAQNRERHQQ AELRRLSQAQ LAQHQDLHSS NPSDLQLREK TDAMLANLRK  2100
QQGPWGPSFV DGSLPSRSTM MFGGMAGQMS LFQDLMMASV QRNCEKGNFM QPNGRGVPGA  2160
TKEALHQQHQ LEPVVSSAMN SQLPTLGMEQ RPCGTSFSDI GRHSGIGHAV GGLGGVTRPS  2220
AEQAAVSAPT SVDFATSLCL GAGGPALGRE VNVSGMATAG LANAGAMTDV SGVSVMDLQQ  2280
QEQQKQQQQE NLNEQQLRSL QQHMSVCGQG SALAVQTDTS LPMLGGSTLA SILLSKGVSS  2340
IRPMKCAEET SADPGMLAGQ PSMTNGVSND RLWDLDSVRG EGYPCGTRPL PQGKLGVEPL  2400
GSNGLISGSA SDLNRQVNQD LVSKARPQQV IDSMGSASER QGCQQLSKQS AGGSLALPLQ  2460
QFPMPVCGSL RKRPRQIGPN GYGSSGCTLP GGDVSSAMRI DTDDAAALFG SSSTLGTSRA  2520
TVSSISSGGT TSAGSGICSL TQSGGRAARP FEAQATPVQM PGLGLPCTRV PESDQCLSPT  2580
VPGEPVNAIS KSDGNCPAAV SPPSGCPPSS NVCRNRSIIK RCKQETRSIP AHGSLEGLLQ  2640
ALGRNSPPPL ESEDEDSDYG IANGGQSEQE RNIIMESSTG AANPSTLAPL VPSKEEMTNL  2700
ESEVAAEDIL MKLLLASSSG RGLNESGAQK EMGRWNTGLP NMPIPVPMPL PAGSTGKPAD  2760
VDTTIHRPMN LIVPENPLLT CVRAGIGMRM PTSLGSRSTA APSANASSLA PLLSSPRDSG  2820
NTGTGTGYWD PCQLHLVQTF MSPPPMFSSG LVLGGSMGGN LPNNTVSNAI GSSGFDTFSS  2880
LLRMMAEDTL PSLYDPSANP PPSNTDPVAC GWRAN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	2470	2476	LRKRPRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	2e-43	MYB family protein