PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG60375.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 458aa    MW: 49767.2 Da    PI: 11.2299
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG60375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix271.2e-08378449267
    trihelix   2 WtkqevlaLiearremeerlr......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 W+ +e laL +  re++  +       + +++  + ++v+++++e g++rs++  ++kw +l+++y++i + 
  GBG60375.1 378 WSLEERLALAKYMREDDAMMAvvqprqKHQRRSVRNDWVARRIKEDGYHRSAEDERKKWADLQNKYREIHDK 449
                 88888888888888887777733332234577888899******************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
MYRSSVRSSG PQAGQGLLSH GDRWALDRGT VWGGEGLVNM GFEIFPRSNG PAISNFGRPP  60
PYRHNKHVGR LHAEAAVLRP VLACRVHGMA VSVAMYGSFA KAARTSWGGR LLRLPNPTTA  120
LHQAKRCVGN AAWQTRSRVP QPQSVFSRSA ARLCEKVLPF IPSSLVGRPK EIVGDVVHAG  180
SGRWDEGFVS AVPSGRGGHG CQILTSSSIV VVGYSCEFGT GGWAVDRNAS ANGRGGGVLR  240
SAQRLPRLWN GRSVRTPVFR RRRKATVECS SIHASGHASL ERLPTARGGV PIPGNVRASG  300
DHVLRCPDNE PVSTLQCGQG TQHPIDAEPP ATSTPSSTGA RPIGRKPRQG RQPAPRSPAG  360
DGDTEDNGEG GKQKKKPWSL EERLALAKYM REDDAMMAVV QPRQKHQRRS VRNDWVARRI  420
KEDGYHRSAE DERKKWADLQ NKYREIHDKC GGSGKPSF