PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG59198.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 708aa MW: 75395.5 Da PI: 7.6694

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG59198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.5	5.4e-11	408	486	1	74
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 rW ++ +l+L+e+r e+ e+l++gk ++ W+ vsk m+++ +r++++Ck +w+ +++ y k+++++k+ + GBG59198.1 408 RWGEDDTLLLLEIRCkqlaaraEKSEKLGNGKGVGKVWDVVSKEMEAGRWKREAEECKRRWNVVRRWYNKLEDNDKRS--G 486 8**********9988888888999999999***************************************99973..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MENQSSTPGF AREDDGRSVG VAHAGYHIQP SLVLSAYASD DCIDAVRQQL IRRAQGMQSS 60 TSPLLRRSGL EGSVVGMQPS DEYMASATPH PLVSVKSIGL SSPCAQVHTD VADECRVDKN 120 SLEEIASSQV VAAINLSASV DDWSGSQIPS HRAHQQSTTT NPHPLPCTAI SAPAAFSLPV 180 LPPTLAFSLP VLPPTLSTPI RTSPAIPSTP STPAASSPCY PTPVMRDLHA GHTDMPPPFS 240 PLLSPPQVST ICPRVHVGHT ATPPPLSPPL SPPPLSSGCP DFRVLSNGNG AAGIVHRQLQ 300 FEELDSGLPK TVLESSHVLA AGSGLRVPPV GSTAHPCGND APAAVDMDAV LQSNENGEKK 360 QGVGACGIGS GGEGVQGGVH VADDVGVNDA AGKDAGEAPA KKKPAGVRWG EDDTLLLLEI 420 RCKQLAARAE KSEKLGNGKG VGKVWDVVSK EMEAGRWKRE AEECKRRWNV VRRWYNKLED 480 NDKRSGRAKY FRMTPTERIA ANLKFNFRRS WYDLLERYYG SGKSKALHPD HVQDPGAEEE 540 SSPPVAGQEA VQEGAGEGGA QEAAEQRAAG GDAGPPRGPS ASSSSTVTAV TDSTPASTKR 600 RKTVNAREQT MHVLNTAMRE QTQAIRDSAN EQSRVSNSCT ELHCNTLSQL CDRELAGQRQ 660 MNELTCTVMR KDITSRERSA EKMCASYTLL AGALRSLRQP RSRRRGGR

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MENQSSTPGF AREDDGRSVG VAHAGYHIQP SLVLSAYASD DCIDAVRQQL IRRAQGMQSS  60
TSPLLRRSGL EGSVVGMQPS DEYMASATPH PLVSVKSIGL SSPCAQVHTD VADECRVDKN  120
SLEEIASSQV VAAINLSASV DDWSGSQIPS HRAHQQSTTT NPHPLPCTAI SAPAAFSLPV  180
LPPTLAFSLP VLPPTLSTPI RTSPAIPSTP STPAASSPCY PTPVMRDLHA GHTDMPPPFS  240
PLLSPPQVST ICPRVHVGHT ATPPPLSPPL SPPPLSSGCP DFRVLSNGNG AAGIVHRQLQ  300
FEELDSGLPK TVLESSHVLA AGSGLRVPPV GSTAHPCGND APAAVDMDAV LQSNENGEKK  360
QGVGACGIGS GGEGVQGGVH VADDVGVNDA AGKDAGEAPA KKKPAGVRWG EDDTLLLLEI  420
RCKQLAARAE KSEKLGNGKG VGKVWDVVSK EMEAGRWKRE AEECKRRWNV VRRWYNKLED  480
NDKRSGRAKY FRMTPTERIA ANLKFNFRRS WYDLLERYYG SGKSKALHPD HVQDPGAEEE  540
SSPPVAGQEA VQEGAGEGGA QEAAEQRAAG GDAGPPRGPS ASSSSTVTAV TDSTPASTKR  600
RKTVNAREQT MHVLNTAMRE QTQAIRDSAN EQSRVSNSCT ELHCNTLSQL CDRELAGQRQ  660
MNELTCTVMR KDITSRERSA EKMCASYTLL AGALRSLRQP RSRRRGGR