PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG58917.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 628aa MW: 63283 Da PI: 6.6882

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG58917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.5e-11	60	104	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++E+rRR+riN+++e Lr l+P++ + + a+ L ++ +YI++L GBG58917.1 60 HMAAEQRRRARINERLEALRGLVPHS-----ARANTAAFLAEVFDYISKL 104 889********************6.....69*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MLPEMGAPLA AAPPGYAYCT PIAQYYQPGL QYPAASTAAG NGRASNTAAG TRSGVCASRH 60 MAAEQRRRAR INERLEALRG LVPHSARANT AAFLAEVFDY ISKLHRQLNR LGAKLIDLNV 120 AATANGNGPD QDDQNDEPPS SPSLPRAAAE MALPAAANSH NSTGGAVGGG SSGSKRGREA 180 MSSKSHHRQN RNGGGIADAA ACGAAAAALK GIGTVRSEDD SDVETENENE PERELGTCPE 240 MAMAAASSVL WNGSDDAQRW VGRNSGATIA MSAAAPTVVG GSNSASAMME RHPHHHRLTP 300 GSPSITPSSN GGASLSTTVG IYPIAGCAGA GGGGVTAAVS AQSTATTLCD DGGAEQQLLP 360 GGPATSSVGG EVGRRSGEDG MSHPFCSLGG GCGGGGGGGG GGGGVSSIGS PTSSSEIGGA 420 MQRRHDDVAG LDPETGSHLA LGGSCEECDT TMTLGLGMSV IGTSSNSRSF TLAQRRQHHQ 480 RQEEDEHHAE ASPDGLLERS NRLNMHEQWM AECVANSVAA TAAAAAAAAA VTSGTTVVAL 540 PPTSSAAFPP LALMQPSVPL LNGPSVAATA TMIDGAVTAQ SWGALAAAAT SQMYPPKKRR 600 RSTPAETCGI SSRIIQGIQR PIAIKPQR

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MLPEMGAPLA AAPPGYAYCT PIAQYYQPGL QYPAASTAAG NGRASNTAAG TRSGVCASRH  60
MAAEQRRRAR INERLEALRG LVPHSARANT AAFLAEVFDY ISKLHRQLNR LGAKLIDLNV  120
AATANGNGPD QDDQNDEPPS SPSLPRAAAE MALPAAANSH NSTGGAVGGG SSGSKRGREA  180
MSSKSHHRQN RNGGGIADAA ACGAAAAALK GIGTVRSEDD SDVETENENE PERELGTCPE  240
MAMAAASSVL WNGSDDAQRW VGRNSGATIA MSAAAPTVVG GSNSASAMME RHPHHHRLTP  300
GSPSITPSSN GGASLSTTVG IYPIAGCAGA GGGGVTAAVS AQSTATTLCD DGGAEQQLLP  360
GGPATSSVGG EVGRRSGEDG MSHPFCSLGG GCGGGGGGGG GGGGVSSIGS PTSSSEIGGA  420
MQRRHDDVAG LDPETGSHLA LGGSCEECDT TMTLGLGMSV IGTSSNSRSF TLAQRRQHHQ  480
RQEEDEHHAE ASPDGLLERS NRLNMHEQWM AECVANSVAA TAAAAAAAAA VTSGTTVVAL  540
PPTSSAAFPP LALMQPSVPL LNGPSVAATA TMIDGAVTAQ SWGALAAAAT SQMYPPKKRR  600
RSTPAETCGI SSRIIQGIQR PIAIKPQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-11	bHLH family protein