PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG46497.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 178aa MW: 19722.9 Da PI: 10.6176 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.5 | 3e-12 | 100 | 174 | 2 | 69 |
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ ++ aLi+a+r+ + +l+++ ++ +W+ev +++ + g+ r + +C++k++n +++kk+ + ++ GBG46497.1 100 WSVDHMIALIRAKRDQDAQLQASGhafahmrTREWKWAEVQERLLKVGVDRPADKCRKKFDNRMQQFKKVHNFMR 174 99*******************87334444449*************************************987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MRQQKANSIT SGVQRLTVGG RDADEAGVGG GLASADNGEG HWSQPEEDTA EAFPLRPPNM 60 GGRGGRRRAA KAPDHHRRKA VAGGANGDGD VDDEGGRNFW SVDHMIALIR AKRDQDAQLQ 120 ASGHAFAHMR TREWKWAEVQ ERLLKVGVDR PADKCRKKFD NRMQQFKKVH NFMRESGK |