PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG42186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 248aa MW: 27655.6 Da PI: 7.0339 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 26.3 | 1.9e-08 | 147 | 221 | 2 | 70 |
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e laL + +e++ + + + ++ + ++ +++m+e g++rs++ +++kw +l+++y +i + ++ GBG42186.1 147 WSLEERLALAKYMQEDDAMMAAVQprqkhqRRSVRNDWMARRMKEDGYHRSAEDVRKKWADLQNKYGEIHDKCRG 221 888888888888887777777532222232667788899***************************999988775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MAGEAAFYDQ RNDCRGYGMA GHFERPRFDN RGRPPLNAAP YVPPDTPPSN SFQPPAEGYP 60 FPTMSEHPVS MSCDASDNEP VSTPQCGQGT QQPIDAQPPA TSAPSSTGGR ASGRKPRQGR 120 QAAPRSPGAD GDTEDDGEGG KQKKKSWSLE ERLALAKYMQ EDDAMMAAVQ PRQKHQRRSV 180 RNDWMARRMK EDGYHRSAED VRKKWADLQN KYGEIHDKCR GSGKPSFWDM PAEDKKREGL 240 TFLLEEEL |