PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY68424.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 100aa    MW: 11798.4 Da    PI: 9.8453
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY68424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.94.1e-062547123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C+  F r  nL+ H r+H
  GAY68424.1 25 YVCEICNHGFQRDQNLQMHRRRH 47
                9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MLENNTNINA PSSSHPFTSS ENDGYVCEIC NHGFQRDQNL QMHRRRHKVP WKLLKRETKE  60
VNKRVFVCPE PSCLHHDSCH ALGDFVGIKK HFRRKHNNHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25250.16e-40C2H2 family protein