PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY68117.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 484aa MW: 53342.6 Da PI: 7.5251

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY68117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.7	1e-07	206	233	4	31
XCHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeL 31 k rr+++NReAAr+sR+RKk + e GAY68117.1 206 AKTLRRLAQNREAARKSRLRKKDKAESV 233 6889******************998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MASHRIGAAG GLSHDSAGPS NLHHHHVPYA TSLHQSFINQ EGPAFDFGEL QEAIVLQGVK 60 FRNDEATKAP LFTAAAGGRP AATLEMFPSW PMRFQQTPRV GSSKSGGESI STDSGSALNT 120 ISSGKAEASQ SQLEQPESPI SNINHIKPSA SNQQQSVEMA NDASRTGPSS SQQNQNHQSA 180 AALTDAKPSQ EKRKGPGSTS DRQLDAKTLR RLAQNREAAR KSRLRKKDKA ESVGARASKS 240 PLSGAAIFDM EYARWLEDDQ RHISELRSGL NQHYSDGDLR IIVDAYISHY DEIFRLKGVA 300 AKSDVFHLIT GMWTTSAERC FLWMGGFRPS ELIKMLISQL DPLTEQQVMG IYSLQQSTQQ 360 AEEALSQGLE QLQQSLIETI AGGPVVDGMQ QMVVALGKLE NLEGFVRQAD NLRQQTLHQL 420 RRILTVRQAA RCFLVIGEYY GRLRALSSLW ASRPRETMIS EDNSCQTTTD LQMVQHSQNH 480 FSNF

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MASHRIGAAG GLSHDSAGPS NLHHHHVPYA TSLHQSFINQ EGPAFDFGEL QEAIVLQGVK  60
FRNDEATKAP LFTAAAGGRP AATLEMFPSW PMRFQQTPRV GSSKSGGESI STDSGSALNT  120
ISSGKAEASQ SQLEQPESPI SNINHIKPSA SNQQQSVEMA NDASRTGPSS SQQNQNHQSA  180
AALTDAKPSQ EKRKGPGSTS DRQLDAKTLR RLAQNREAAR KSRLRKKDKA ESVGARASKS  240
PLSGAAIFDM EYARWLEDDQ RHISELRSGL NQHYSDGDLR IIVDAYISHY DEIFRLKGVA  300
AKSDVFHLIT GMWTTSAERC FLWMGGFRPS ELIKMLISQL DPLTEQQVMG IYSLQQSTQQ  360
AEEALSQGLE QLQQSLIETI AGGPVVDGMQ QMVVALGKLE NLEGFVRQAD NLRQQTLHQL  420
RRILTVRQAA RCFLVIGEYY GRLRALSSLW ASRPRETMIS EDNSCQTTTD LQMVQHSQNH  480
FSNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	228	RKSRLRKKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-178	bZIP family protein