PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67933.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 536aa MW: 58604.2 Da PI: 4.7674

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94	1.6e-29	40	151	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT.............XTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks.............kekiweFkhks 85 Fl+k+y++++d ++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y+ k +++ weF+++ GAY67933.1 40 FLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYNGGKRILFPFP--PlflltehqgfrkvDPDRWEFANEG 134 9******************999*******************************85554332222..1233444444443359***** PP XXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkks 102 F +g+k+ll++i r+k GAY67933.1 135 FLRGQKHLLRSISRRKP 151 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS 60 PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYNG GKRILFPFPP LFLLTEHQGF 120 RKVDPDRWEF ANEGFLRGQK HLLRSISRRK PAHGHGHQQS HQQNAQSSSV GACVEVGKFG 180 LEEEVERLKR DKNVLMQELV RLRQQQQATD SQLQTMVQRL QGMEQRHQQM MAFLAKAVQS 240 PGFLAQFVQQ QNDSNKRIAE ANKKRRIRQE GVAEDDHATT ADGQIVKYQP SMNEAAKSML 300 RKIIKMESSQ LESFNNNHDN YLIGDGASSS NTGSTSSRMS GVTLQEVPQT SGPYAPAASG 360 ILADGPSAAA TERQSSSRST ASEKTTTDQF PDINLLVAAQ EATSLPISES DVIMPDLAQI 420 PEIMPESMDG IPAESFIGSR MENGGYVDPT SLIVNGSVPI EIDDISTDAD IDALLESSGL 480 WDIVHSPVPE DIESTSVDVK TVGNEMQAIE NGWNKVQSMD QLTEQMGLLN SETKEV

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS  60
PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYNG GKRILFPFPP LFLLTEHQGF  120
RKVDPDRWEF ANEGFLRGQK HLLRSISRRK PAHGHGHQQS HQQNAQSSSV GACVEVGKFG  180
LEEEVERLKR DKNVLMQELV RLRQQQQATD SQLQTMVQRL QGMEQRHQQM MAFLAKAVQS  240
PGFLAQFVQQ QNDSNKRIAE ANKKRRIRQE GVAEDDHATT ADGQIVKYQP SMNEAAKSML  300
RKIIKMESSQ LESFNNNHDN YLIGDGASSS NTGSTSSRMS GVTLQEVPQT SGPYAPAASG  360
ILADGPSAAA TERQSSSRST ASEKTTTDQF PDINLLVAAQ EATSLPISES DVIMPDLAQI  420
PEIMPESMDG IPAESFIGSR MENGGYVDPT SLIVNGSVPI EIDDISTDAD IDALLESSGL  480
WDIVHSPVPE DIESTSVDVK TVGNEMQAIE NGWNKVQSMD QLTEQMGLLN SETKEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-131	HSF family protein