PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67800.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 404aa MW: 47147.4 Da PI: 6.4392

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.9	1.9e-19	83	158	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YAke GF vr +++++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH l+p GAY67800.1 83 FYNCYAKEQGFGVRSREKYRG---------KLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMETKRWRIIEVELEHNHLLSP 158 9***********9987776.........89*****99888.....*********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MVHQLVKNEE KNNENQILCG DLKFWMDEVS LNTEPVGDDD TDDFEVVGDF AMTEYVGQTR 60 IIQNPLPPAV GMEFETYDDV YYFYNCYAKE QGFGVRSREK YRGKLSCSSA GFKKKSEANR 120 PRPETRTGCP AMIKFRLMET KRWRIIEVEL EHNHLLSPRS GKFCKSHKHI GVFSFLQNEV 180 STSYFEGYLD KNTPLKEFLD KYDQALQANY QLEALADMDS RNSSCIQKPR CYYEFQLSKL 240 YTNEMLRKFQ KEVEAITKHV SADGPITYIV KEEFEVGSNE KDSRAFDTLY NASNLEVLCV 300 CGLFNFRGYL CRHILCVLNQ SGVQEIPSQY ILSRWRKDVK RSYVLNHSCS GVDIKNQVHR 360 YDDLYKRIVQ VVEEGRQSQD RYKVTLQALD EILNKLHLVE DHQV

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MVHQLVKNEE KNNENQILCG DLKFWMDEVS LNTEPVGDDD TDDFEVVGDF AMTEYVGQTR  60
IIQNPLPPAV GMEFETYDDV YYFYNCYAKE QGFGVRSREK YRGKLSCSSA GFKKKSEANR  120
PRPETRTGCP AMIKFRLMET KRWRIIEVEL EHNHLLSPRS GKFCKSHKHI GVFSFLQNEV  180
STSYFEGYLD KNTPLKEFLD KYDQALQANY QLEALADMDS RNSSCIQKPR CYYEFQLSKL  240
YTNEMLRKFQ KEVEAITKHV SADGPITYIV KEEFEVGSNE KDSRAFDTLY NASNLEVLCV  300
CGLFNFRGYL CRHILCVLNQ SGVQEIPSQY ILSRWRKDVK RSYVLNHSCS GVDIKNQVHR  360
YDDLYKRIVQ VVEEGRQSQD RYKVTLQALD EILNKLHLVE DHQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-62	FAR1 family protein