PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY67601.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 403aa    MW: 46564.9 Da    PI: 6.7354
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY67601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.66.4e-15125209898
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++  +++l++p kf+ ++g +   s   +l  ++gr+W+v l  +k ++++++ +GW++Fv+++ + +g f++Fk++++s f  +v +f+
  GAY67601.1 125 PSTIHNKMLRIPPKFVGQFGDE--LSSIAKLAVPDGRVWQVGL--TKFGRKIWFHQGWQNFVESQSISAGYFLLFKYEKNSIF--RVLIFD 209
                 45667788********999755..7779***************..********************************999999..888876 PP
2B341.82e-133244001796
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + p +fa ++  + e sk + ++ +sgr+W++ + +++  g+++l+kGW +  +  +L egD+++F+l+++++  ++++v
  GAY67601.1 324 YAPARFAYQY--VDEDSKSVEVQAPSGRKWSLGI-HWRATGGFFLAKGWAGVSDYVHLTEGDICIFELVRHRDVVFKLHV 400
                 6688998655..4557889***************.7888899*************************9976655455555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MRDSLFPFLL YFSHLSLIFL YTKHFPMMII ELISLFPCSG LSFVALLNCL SLFLLLASMY  60
LAGKVFQGVL RKRVQVSDRV IEFQYESLYV EFNHFVESQQ LLGTGGIMSS SAAETSSMFY  120
SIILPSTIHN KMLRIPPKFV GQFGDELSSI AKLAVPDGRV WQVGLTKFGR KIWFHQGWQN  180
FVESQSISAG YFLLFKYEKN SIFRVLIFDM TACEIDYPYE DDMACEMCVE ISEEQFKHEA  240
ELLSRKRKME DGLERDEPNA EPDLLVSLRK SGIYITEKYK ELYSTEELER AVYIARAFKA  300
TNPKPNPLFM IIWKANDKPC REVYAPARFA YQYVDEDSKS VEVQAPSGRK WSLGIHWRAT  360
GGFFLAKGWA GVSDYVHLTE GDICIFELVR HRDVVFKLHV FHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244249SRKRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-36B3 family protein