PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY67321.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 526aa    MW: 59907.2 Da    PI: 10.3297
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY67321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.11.2e-06477500226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 k+ lC+++ + G C +Gd+CkF H 
  GAY67321.1 477 KQQLCPYYPK-GRCYFGDNCKFLHE 500
                 789*******.*************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MAPKQLNSCQ GHIVTKKELL PCPVDRKGKT SKRVHFERNV IREVSGFSPY EKMIDALLKV  60
GKDKKALKLA KRKLCTYERA KMKHGEMSNV LCRMRATGGG KKKKRKQKSS ASMAAPESEQ  120
VIFIEAGDDE YSTNSGGSDL GYDSDLDPSY SPLEDTHATF SKLSIGKKSK SRIGKDLDVG  180
VDEIEEKVIQ KIIEAGQQEK LKVEQCKVYL RNNGLRLTGN KPTLIQRIKE HLEFNIAACS  240
ASGPPCGKRI VAGRIVKESY GAAKQQHTFT IEVLWSKGEK PLPPLHPLLI KGRNLYRLKI  300
LRQRWEDEGE RHKVLMEKHS KGEIRIHGKE KRKLLKANRM SINQVPKSCQ SQMNLIVTEK  360
VEILSQQQLA LNMDSNQMKN GPQQLSVQPQ KPSLSVDHRK LAAQPQLSAD SKKAAKLLSQ  420
LVEQELAVMP NNCQTQVPQD PIVKLRSIRE APINRQRLKS INHHPPTCPP QEQSCMKQQL  480
CPYYPKGRCY FGDNCKFLHE QRDNGDQRRE YRWHHGLPRQ FERREN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106KKKKRK