PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66370.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 302aa    MW: 34285.4 Da    PI: 6.7996
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.22.5e-27133222290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fYn+Y+ ++GF +r++++++skr+g+i+++ +vC+keg+r++ +++ ++k+ r r+ tr+gCka++ v+k++ gkw+vtk+++eH+H+l+
  GAY66370.1 133 FYNAYGMRLGFITRINYHTRSKRDGSIISQSLVCNKEGYRKPPSSRhEVKSIRLRPPTRVGCKAMISVRKMSFGKWVVTKFVKEHTHALS 222
                 ****************************************99887747788899**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEILVETIIQ NFLAAVDSRH GMGIQLKQND KDAQDKVSDD ANDNEQEDSI LYSEIQLEQN  60
SYEISGGTHF ITTDNEAHLG NEGTTIGSSV EMVSQVEKND KMTHSSGVQL NTVGGDEPYV  120
GQEFESVAAA HAFYNAYGMR LGFITRINYH TRSKRDGSII SQSLVCNKEG YRKPPSSRHE  180
VKSIRLRPPT RVGCKAMISV RKMSFGKWVV TKFVKEHTHA LSSTQGQTTV LYRQIVSEDW  240
RVEELTQQLI IERKRSASLR RCLDLLFNHI EEHTQDLSKK IQYIVDNVDK IESEGKTHRN  300
PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-66FAR1 family protein