PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66162.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 520aa MW: 56152 Da PI: 6.3927

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.1e-24	173	215	2	44
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 epgrCrRtDGKkWRCsr+v +++k+CErHlhrgr rsrk++e GAY66162.1 173 LEPGRCRRTDGKKWRCSRDVAPDQKYCERHLHRGRPRSRKPVE 215 69**************************************987 PP
2	QLQ	53.9	5.5e-19	113	146	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+aQ+ +L++Q+l+yK+++a++PvP++Ll++ GAY66162.1 113 PFTNAQWTELERQALIYKCMVASVPVPSDLLFPF 146 8******************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MMSGRIMDAC DFSFINEAAA EEEGKVKEAG SNRHRPSPSD EFGWGDAVAG GPTCNNNINN 60 SSSSNHIYKT IGYVSSDSSG SSTSMKTLQP FQFDIAAATV NESPGMAARM GFPFTNAQWT 120 ELERQALIYK CMVASVPVPS DLLFPFTRNR NSAAAAAAPV GLDLIRLSKG GDLEPGRCRR 180 TDGKKWRCSR DVAPDQKYCE RHLHRGRPRS RKPVELQPPP NSKKKTRLQS HPLNTTNTVN 240 NNNNLDFSAS QFVRNFTQYP HPHVREQRCL DKDWMMRGEA VHLPSNAAGT EWHHLINNPA 300 SPVNINQHYH LEEPLNLNSF ASFSAEEAQQ SNDCPFFTDP DLVPRVFIDA WSNANGVSNG 360 DDQIHNTNSG TKSSVSSSGN LSLSPLSLSM GGNSTIDEEM GQLQMGLGLV ESSQDHKCDT 420 NPQLSSWLNP DSWAPGGPLA EVLRPSTVPA SASGPPSPAA GNGDSDSPPA TTVSSPSGVL 480 QKALVSWSDS SGNSSPTPGS SRTNKSEIAL LWFGQGKLES

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MMSGRIMDAC DFSFINEAAA EEEGKVKEAG SNRHRPSPSD EFGWGDAVAG GPTCNNNINN  60
SSSSNHIYKT IGYVSSDSSG SSTSMKTLQP FQFDIAAATV NESPGMAARM GFPFTNAQWT  120
ELERQALIYK CMVASVPVPS DLLFPFTRNR NSAAAAAAPV GLDLIRLSKG GDLEPGRCRR  180
TDGKKWRCSR DVAPDQKYCE RHLHRGRPRS RKPVELQPPP NSKKKTRLQS HPLNTTNTVN  240
NNNNLDFSAS QFVRNFTQYP HPHVREQRCL DKDWMMRGEA VHLPSNAAGT EWHHLINNPA  300
SPVNINQHYH LEEPLNLNSF ASFSAEEAQQ SNDCPFFTDP DLVPRVFIDA WSNANGVSNG  360
DDQIHNTNSG TKSSVSSSGN LSLSPLSLSM GGNSTIDEEM GQLQMGLGLV ESSQDHKCDT  420
NPQLSSWLNP DSWAPGGPLA EVLRPSTVPA SASGPPSPAA GNGDSDSPPA TTVSSPSGVL  480
QKALVSWSDS SGNSSPTPGS SRTNKSEIAL LWFGQGKLES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	7e-35	GRF family protein