PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65791.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 550aa MW: 59225.9 Da PI: 5.0985

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.9	1.1e-14	111	150	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ GAY65791.1 111 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCHNNVEN 150 89************************.******9875 PP
2	TCR	51.3	2.2e-16	195	234	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+C+C dCkN e GAY65791.1 195 KHNKGCHCKKSGCLKKYCECFQANILCSENCRCMDCKNFE 234 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MGEGEGGEFP PKKSQSESGG DIPAKKLARQ LDFTGGFVGS VILPEHPQSQ AVTANSHPPP 60 QPQPKPVVPP VPPPPPLPGQ ATQPPVRVPK PESPKSRSRS NVEVKENTPK KQKQCNCKHS 120 RCLKLYCECF ASGIYCDGCN CVNCHNNVEN EAARREAVEA TLERNPNAFR PKIASSPHGT 180 RDNKEETGEV LMLGKHNKGC HCKKSGCLKK YCECFQANIL CSENCRCMDC KNFEGSEERQ 240 ALFHGDHANN MAYIQQAANA AITGAIGSSG YAETISELLH PPPYLQFLLL VLVALQQWVL 300 QNSHIDIIQP QDLKELCSVL VVLSSEAAKS VAVQRNTTEK QAEDRAGTSV ASSAQGRLQS 360 HKEPDVDRTV TDDCSSANQA DKVGPDDSGS DGSDGQKARP MSPGTLALMC DEQDTIFMAA 420 SSPNRLTGHG CNTSSQLPYG QGMTEVYAEQ ERIYSSLART EVGSQKDALS NGTASSRTGT 480 GNQPATVSNG VSKAYGPSAL AAPAAKMSQM ISYMRMKCLC IEMQLAHIRD DDDDDDDDDD 540 DDDDDDNDSG

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MGEGEGGEFP PKKSQSESGG DIPAKKLARQ LDFTGGFVGS VILPEHPQSQ AVTANSHPPP  60
QPQPKPVVPP VPPPPPLPGQ ATQPPVRVPK PESPKSRSRS NVEVKENTPK KQKQCNCKHS  120
RCLKLYCECF ASGIYCDGCN CVNCHNNVEN EAARREAVEA TLERNPNAFR PKIASSPHGT  180
RDNKEETGEV LMLGKHNKGC HCKKSGCLKK YCECFQANIL CSENCRCMDC KNFEGSEERQ  240
ALFHGDHANN MAYIQQAANA AITGAIGSSG YAETISELLH PPPYLQFLLL VLVALQQWVL  300
QNSHIDIIQP QDLKELCSVL VVLSSEAAKS VAVQRNTTEK QAEDRAGTSV ASSAQGRLQS  360
HKEPDVDRTV TDDCSSANQA DKVGPDDSGS DGSDGQKARP MSPGTLALMC DEQDTIFMAA  420
SSPNRLTGHG CNTSSQLPYG QGMTEVYAEQ ERIYSSLART EVGSQKDALS NGTASSRTGT  480
GNQPATVSNG VSKAYGPSAL AAPAAKMSQM ISYMRMKCLC IEMQLAHIRD DDDDDDDDDD  540
DDDDDDNDSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein