PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65754.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 212aa MW: 23666.2 Da PI: 9.3019

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.0003	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C++ F ++ L H++ H GAY65754.1 59 FKCLYCPRKFYSSQALGGHQNAH 81 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MKMADPNMYN FLMSQQQPPS CSNPRPTKRQ AQAQQHPHPS LPPPPAPVAT STSSTARLFK 60 CLYCPRKFYS SQALGGHQNA HKRERAAARR NITFPVNVDP PSCFTAASHH VNPTHHFPSF 120 DHQHGSPSPF LVDHARFDPV QYPYQYQFHQ YGQYNQYHSS SSTTSAVVAA SPTNGPNYHS 180 FAAGPVTPNA FAFTQSDDDY AEKVKVDLNL RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14010.1	9e-18	C2H2 family protein