PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 198aa MW: 23051.2 Da PI: 8.874 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.9 | 5.5e-26 | 25 | 116 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr...traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+ Y+++vGF++r++++++s ++++i+ r++vCskeg+r+ + ++ + +r +r+ tr gC+a+l++ ++ gkw+++ +++eHnHel+p GAY65498.1 25 EFYEMYGRRVGFTIRNNRTRRSLKDNSIIGREYVCSKEGFRAGKCTN--RGSRvllPRPATREGCNAMLRIAAKDGGKWVIYGFVKEHNHELNP 116 6****************************************999888..33333569**********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MFPLTSESTE PYIGMEFDSA EDAREFYEMY GRRVGFTIRN NRTRRSLKDN SIIGREYVCS 60 KEGFRAGKCT NRGSRVLLPR PATREGCNAM LRIAAKDGGK WVIYGFVKEH NHELNPSKIP 120 PRRSHRIAFS EDVKDLKIRE LSTELHHEKK KSAAYQEQLC MVLKFIEEHT QRMSLKVQVV 180 TNNMQELESE ERESSYPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 6e-46 | FAR1 family protein |