PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY65425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 147aa MW: 16916.4 Da PI: 9.1953 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.8 | 2.5e-10 | 58 | 146 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++s+ +++ ++p kfa+e+ + + +++ed + r+ ++ ++r+++ ++ l W + + n L+ gD+++F+ + r++f l+++vf+ GAY65425.1 58 ILQSSDITHNAAYVPGKFANEFFSRDVK--SIKIEDDKKREHTLLNNWRRNG-GFALL--WAKLTRNNSLQKGDICIFEIVPRNGFLLKLSVFS 146 45788888888***********655555..59999*9999999888766665.66666..*******************998899988888886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 147 aa Download sequence |
MVEKNESDDY DEFDLWASLE EMGMCIARKE RTVTKEESRR AVKIAGSLRP KIPSFMVILQ 60 SSDITHNAAY VPGKFANEFF SRDVKSIKIE DDKKREHTLL NNWRRNGGFA LLWAKLTRNN 120 SLQKGDICIF EIVPRNGFLL KLSVFSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-14 | B3 family protein |