PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65048.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 301aa    MW: 32982.2 Da    PI: 8.1678
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018208230123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++Cg  Fs+   L  H+r+H
  GAY65048.1 208 HECSICGAEFSSGQALGGHMRRH 230
                 78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MMMMADEAHQ EEDKIMEPKD QTQIIMKGKR TKRPRPQSPL ALGMVYSCSS SLESGGEGER  60
IFSTNSPTTS VEFATTTEQE EDMANCLILL AQGDAKKISS SSSSHPLDQP ATTSKAAAVA  120
TGLYVHQCKT CNRCFPSFQA LGGHRASHKK PKVINNNNIE ASKKAFVLMD KEDDRFSNMS  180
TTLSLQMANN RDAANLCART NNKANKVHEC SICGAEFSSG QALGGHMRRH RAFTTSTTAL  240
SMGTSSSLDR QSQQAKKPRN ILQLDLNLPA PEDDRHESKF AFASKEQVII FSASPLVDCH  300
Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13236KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.13e-62C2H2 family protein