PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65014.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 426aa MW: 49246.1 Da PI: 8.5622

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.7	1.5e-21	27	111	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY YAk +GF ++k++s++ k ++e+++++f C+++g ++e++ ++r+ +++Cka l+vk+++ gkw+v+++ +eHnHel GAY65014.1 27 SFYLMYAKCTGFGISKKSSHRLKLSREFIDAKFACTRYGIKRESSAI-----NQRPCLKVDCKALLHVKRNSCGKWYVQNFIKEHNHELY 111 59*************************************998766.....99********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
SFTLTCLGKN LEPYTGLEFD TQDDAYSFYL MYAKCTGFGI SKKSSHRLKL SREFIDAKFA 60 CTRYGIKRES SAINQRPCLK VDCKALLHVK RNSCGKWYVQ NFIKEHNHEL YPSHAHYFPC 120 HRSIAFSNTH SINMLHAVSV GTNKIFAAMT RKNGGYKNIR YTDKDIRNHL DKERRLALKL 180 GDARAMLNHF TQMQEENPNF FYAVDLDEEQ RLKNIFWVDA TSIEDYKIFG DVSFDTKFQV 240 EVLGASACFS EQKLEVGIIK TFEVKDFEKI VAFMRWSKDA KSLDSTSNIP KGIQFKKQHF 300 DKLFYQATKL SDEGLLSRGS FNIAYCALQD ALEKCIRVNR SLKEHEVELD GAYKVDKENI 360 DSNLLDDISI LDPQISSTKE APKRMNKRIE KCKKRILNTK SRKEHSATRD ENVIDLCDTQ 420 DCLQEL

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

SFTLTCLGKN LEPYTGLEFD TQDDAYSFYL MYAKCTGFGI SKKSSHRLKL SREFIDAKFA  60
CTRYGIKRES SAINQRPCLK VDCKALLHVK RNSCGKWYVQ NFIKEHNHEL YPSHAHYFPC  120
HRSIAFSNTH SINMLHAVSV GTNKIFAAMT RKNGGYKNIR YTDKDIRNHL DKERRLALKL  180
GDARAMLNHF TQMQEENPNF FYAVDLDEEQ RLKNIFWVDA TSIEDYKIFG DVSFDTKFQV  240
EVLGASACFS EQKLEVGIIK TFEVKDFEKI VAFMRWSKDA KSLDSTSNIP KGIQFKKQHF  300
DKLFYQATKL SDEGLLSRGS FNIAYCALQD ALEKCIRVNR SLKEHEVELD GAYKVDKENI  360
DSNLLDDISI LDPQISSTKE APKRMNKRIE KCKKRILNTK SRKEHSATRD ENVIDLCDTQ  420
DCLQEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	382	388	PKRMNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-63	FAR1 family protein