PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GATA | ||||||||
Protein Properties | Length: 121aa MW: 13886.2 Da PI: 11.0553 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 62 | 7.3e-20 | 55 | 89 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C tt+Tp+WR gp g+ktLCnaCG++y++ +l GAY64921.1 55 CSHCETTQTPQWRMGPLGPKTLCNACGVRYKSGRL 89 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MPPEQKAQAR VMMRKRVAPA PLADYNNSCV VANNYKKQKG RRRERIVQQQ QQRKCSHCET 60 TQTPQWRMGP LGPKTLCNAC GVRYKSGRLL PEYRPAASPT FDGDKHSNFH KKILKKKGFM 120 G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 39 | RKRVAPAPLADYNNSCVVANNYKKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 2e-31 | GATA family protein |