PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64818.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 413aa MW: 47252.6 Da PI: 8.8885

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.2e-18	35	119	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++eY+k+ GF v +++s+k +g + f C ++g++++++++ +++++ +tgC a+l + +dgkw + +++leHnH+l GAY64818.1 35 YFKEYGKKKGFPVMRRSSRKD-SDGILRNVSFACGRSGETRSKSTN---ILKPQPNIKTGCSARLGAGLGDDGKWTIRSINLEHNHPLL 119 89************99997.8999*********9999877...999*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MENAIEDIEE LEKIEEEDEP MIGMSFNTDT EMFMYFKEYG KKKGFPVMRR SSRKDSDGIL 60 RNVSFACGRS GETRSKSTNI LKPQPNIKTG CSARLGAGLG DDGKWTIRSI NLEHNHPLLT 120 PTKSRLFRCN RSLSAHAKKK LDINDRAGIK LSKNYHCSRF QFRGILCRHA ITIMIRNDME 180 VLPEKFILRR WRKDVWRCHS RVKTSHELHS CTDEQKRYEK MCVSFAEVAN VAAKDVESYN 240 LVLNWIEKVR IDLPETIQCG GNDVTIITGQ GSCSNSVGIE MHDVETVRDP VVKRRKCRPP 300 CQRKKSTKSS KSARSNAKDG HVSDQVATMI PTFQNLQQSS VDRNMYPHGV MDYSNGLMNL 360 HHITGDNVYP TATQNSSTHP QLQPQVHGHF QQLLFHQNNE YGVNREFGSD FEE

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MENAIEDIEE LEKIEEEDEP MIGMSFNTDT EMFMYFKEYG KKKGFPVMRR SSRKDSDGIL  60
RNVSFACGRS GETRSKSTNI LKPQPNIKTG CSARLGAGLG DDGKWTIRSI NLEHNHPLLT  120
PTKSRLFRCN RSLSAHAKKK LDINDRAGIK LSKNYHCSRF QFRGILCRHA ITIMIRNDME  180
VLPEKFILRR WRKDVWRCHS RVKTSHELHS CTDEQKRYEK MCVSFAEVAN VAAKDVESYN  240
LVLNWIEKVR IDLPETIQCG GNDVTIITGQ GSCSNSVGIE MHDVETVRDP VVKRRKCRPP  300
CQRKKSTKSS KSARSNAKDG HVSDQVATMI PTFQNLQQSS VDRNMYPHGV MDYSNGLMNL  360
HHITGDNVYP TATQNSSTHP QLQPQVHGHF QQLLFHQNNE YGVNREFGSD FEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	305	RRKCRPPCQRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-13	FAR1 family protein