PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64779.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HD-ZIP
Protein Properties Length: 300aa    MW: 34389.2 Da    PI: 5.4798
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox551.4e-17116168456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++f++eq++ Le +Fe++  p  +++ ++A++lgL+ rqV +WFqN+Ra+ k
  GAY64779.1 116 KRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSK 168
                 568************************************************99 PP
2HD-ZIP_I/II104.77.2e-34115206293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +krr+s+eqvk+LE +Fe+e + e++ K+++a eLglqprqva+WFqn+RAR ktkq+E++y++Lk+++++l+++ e +++e+++L  +l++
   GAY64779.1 115 NKRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSKTKQIEHEYTKLKAEFETLASSYELMRREHQSLLVQLQK 206
                  79************************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MRDSPLSPFY HFEPEAVTEG DTVTIKSSRI SLFGLKQESG NICQTHKTSY TWTVVPGIRS  60
NPFQDDINVT RHASSSLMNS EIPERTAAAA VKFRGLNLDW TDMQQPIASF GTGNNKRRFS  120
DEQVKSLEFM FESEARPESR MKHRMADELG LQPRQVAIWF QNKRARSKTK QIEHEYTKLK  180
AEFETLASSY ELMRREHQSL LVQLQKLKNL LGKGHEDTNE NSGDGKSENE ITTESNERPS  240
QIYVPSSDDR SRNIESTVIM KDFAATNVEE QTESSGNWCK FESGFLDETS STLPWWELWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-30HD-ZIP family protein