PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64419.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 585aa MW: 65233.1 Da PI: 8.634

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64	4.3e-20	101	191	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +Y+eYA++vGF +rk++++++ +g+it rt+vCs++g+r+ ++ + + + r+ +a trtgC+a+++v ++ + +w + l+ HnH+l+p GAY64419.1 101 CYQEYARTVGFGIRKHNKRRN-VKGNITGRTWVCSRQGFRAAKHMQnRCRGREAKAITRTGCRAQFRVIYNEdTRRWACSFLQRVHNHNLTP 191 6************999888.7788**********99988746788999*********99999899************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MTDSDEGLYD GDDMQYQINV TSDDERSSDA SAHNEVETDN EGAGMVAEPQ LNIEGDNRGG 60 NGQLENDTQQ QQCTDDRSEA QSALPEMLAK EFASEEEAGI CYQEYARTVG FGIRKHNKRR 120 NVKGNITGRT WVCSRQGFRA AKHMQNRCRG REAKAITRTG CRAQFRVIYN EDTRRWACSF 180 LQRVHNHNLT PPQLVHHIRS HRGVTGPDLS AALSLHKVGV KPSQIHEFMV DRSGGYDKVG 240 YNRRDVENRL AAKRHASAMF RLVREEIDKE ALLTAEMCDQ DIMSTTYRVR RFGSVGKEVK 300 VVINETSKTL SCTCKLLETI GIPCSHSFVV CKAQNMTEIP SSMILSRWSK AAKIKAHTSS 360 DISYNKSHYM TELARIGQIY AACRSLLRFA GSSLAAYNVA ITDIHQLTLK LQAMSHTEEP 420 ARQPLARRET VVQDPKVVLT KGSVKKTKMG QPQQRKCSRC GQRGHNVRKC KKRGGTGQQL 480 DDCSSHCMEF FCGSNVMGPN ATDAADTNHA PQQPTRYLNV LSWQQIGENG RPFSPTSESW 540 FQQFSASTAS QSTDPTLNTS AFASVSNCIA TSSSTPTNYA HIWNL

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MTDSDEGLYD GDDMQYQINV TSDDERSSDA SAHNEVETDN EGAGMVAEPQ LNIEGDNRGG  60
NGQLENDTQQ QQCTDDRSEA QSALPEMLAK EFASEEEAGI CYQEYARTVG FGIRKHNKRR  120
NVKGNITGRT WVCSRQGFRA AKHMQNRCRG REAKAITRTG CRAQFRVIYN EDTRRWACSF  180
LQRVHNHNLT PPQLVHHIRS HRGVTGPDLS AALSLHKVGV KPSQIHEFMV DRSGGYDKVG  240
YNRRDVENRL AAKRHASAMF RLVREEIDKE ALLTAEMCDQ DIMSTTYRVR RFGSVGKEVK  300
VVINETSKTL SCTCKLLETI GIPCSHSFVV CKAQNMTEIP SSMILSRWSK AAKIKAHTSS  360
DISYNKSHYM TELARIGQIY AACRSLLRFA GSSLAAYNVA ITDIHQLTLK LQAMSHTEEP  420
ARQPLARRET VVQDPKVVLT KGSVKKTKMG QPQQRKCSRC GQRGHNVRKC KKRGGTGQQL  480
DDCSSHCMEF FCGSNVMGPN ATDAADTNHA PQQPTRYLNV LSWQQIGENG RPFSPTSESW  540
FQQFSASTAS QSTDPTLNTS AFASVSNCIA TSSSTPTNYA HIWNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-24	FAR1 family protein