PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64385.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family AP2
Protein Properties Length: 426aa    MW: 47171.7 Da    PI: 9.4067
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.82.8e-1371127155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  GAY64385.1  71 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 127
                 57*******************6666777775555599******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MMASSSSDPG LKHEVGSSSG CGGGGESSEA VIANDQLLLY RGLKKAKKER GCTAKERISR  60
MPPCTAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQGAYDD EEAAARAYDL  120
AALKYWGPGT LINFPVTDYT RDLEEMQNVS REDYLASLRR KSSGFSRGIS KYRGLSSRWD  180
SSLARMAGSE YFNNAHYGAA DDPSTESEYL GGFCIDRKID LTSYIKWWGP NKTRQADSAK  240
KSLEEGKLAY AEDISSELKK SEWEIRPTEP YQMPRLGVSP GGKKHKGSAV SALSILSKST  300
AYKNFQEKAL KKQDSNTDND ENENKNIVNK MDYGKAVEKS TGHDGRSERL GAALGMTGGL  360
SLQRNAFPLA PFLSAPLLTN YNTIDPLVDP ILWSSLVPAL PTGLPRNSEV TKTESSSTYT  420
FFRPEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-157AP2 family protein