PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64340.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 370aa MW: 41632.1 Da PI: 6.5862

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.3	1.3e-08	193	240	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++ Lq GAY64340.1 193 SHSLAERVRREKISERMKILQKLVPGC----DKVTGKAFMLDEIINYVQFLQ 240 8***********************9....555**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MAAFSYQQHH HPFLLDSSEF IEEGSFFSQL YYPPKFPTHD DHQEMIVVNN NSNNLLDAAA 60 VFETSCGDNH DHHSDDNCNE PSNNNSLATK NQSTAVSSTE QQVTQSTVTT TATTTRMDKK 120 RKNRTNASSS FNSAQSKDPR EVKSKKQKKG NVNDAKKEEK ENSPKADSEK KVAKEPPKDY 180 IHVRARRGQA TDSHSLAERV RREKISERMK ILQKLVPGCD KVTGKAFMLD EIINYVQFLQ 240 NQVEFLSMKL ASVNPMFYDF GMDLDNTFMV RPDDQQNLNS IIAASASAPQ VQCSPTAQLT 300 AFADTTTAFA PADHRNNYPV LDTAFLLQQG QRPNALIYQD NGNSLLWDVE DQKQRFLNPS 360 GFTSNLCSFN

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MAAFSYQQHH HPFLLDSSEF IEEGSFFSQL YYPPKFPTHD DHQEMIVVNN NSNNLLDAAA  60
VFETSCGDNH DHHSDDNCNE PSNNNSLATK NQSTAVSSTE QQVTQSTVTT TATTTRMDKK  120
RKNRTNASSS FNSAQSKDPR EVKSKKQKKG NVNDAKKEEK ENSPKADSEK KVAKEPPKDY  180
IHVRARRGQA TDSHSLAERV RREKISERMK ILQKLVPGCD KVTGKAFMLD EIINYVQFLQ  240
NQVEFLSMKL ASVNPMFYDF GMDLDNTFMV RPDDQQNLNS IIAASASAPQ VQCSPTAQLT  300
AFADTTTAFA PADHRNNYPV LDTAFLLQQG QRPNALIYQD NGNSLLWDVE DQKQRFLNPS  360
GFTSNLCSFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	148	KKRKNRTNASSSFNSAQSKDPREVKSKKQK
2	119	160	KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	5e-54	bHLH family protein