PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63865.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 272aa    MW: 31225.8 Da    PI: 5.6803
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-0738111380
        FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                 Y++ +k +GF++ k++s+k  +++e +  t  Cs +gk+++  ++     r +++t+t+Ck k++ +   d kwev++
  GAY63865.1  38 YKKNGKFMGFEIIKRTSSKG-DDEELKYVTSSCSPSGKPKSLLNH---PFRLQPTTKTNCKVKVRATTCLDRKWEVMS 111
                 8899999********99998.8888**************998777...8999***********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MFRVDDKNDT SNDPNVEEII KPKIGMVCYT NLDLFESYKK NGKFMGFEII KRTSSKGDDE  60
ELKYVTSSCS PSGKPKSLLN HPFRLQPTTK TNCKVKVRAT TCLDRKWEVM SRYGKITCQP  120
ANLPKSTCKT PSTVGNFVGY NGFGISNLNS LRVVSEFGIE KKYVKYQPRS SRHKTLHRLV  180
VFSTAATTRR HQLFLFSLNF TNTATTHDHE ELEEGEYEED EVEVDEDEEE ENGSVHDDGE  240
GEREADTENY ESENDLQHRE LQPVLKMRVE KT